Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D03
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.1  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   4.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.2  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 123 IHKQSTWITCHIMLC 79
           IH    W+TC ++ C
Sbjct: 106 IHLCKLWLTCDVLCC 120


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 123 IHKQSTWITCHIMLC 79
           IH    W+TC ++ C
Sbjct: 106 IHLCKLWLTCDVLCC 120


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 123 IHKQSTWITCHIMLC 79
           IH    W+TC ++ C
Sbjct: 106 IHLCKLWLTCDVLCC 120


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 356 CNDNSDEEKYFKCH 315
           C +N +EE Y++ H
Sbjct: 43  CRNNGEEEAYYRKH 56


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 303 YFILLRTIIYTFE*HFDHFKDC 238
           +FIL+ T+I+ +    D  KDC
Sbjct: 8   FFILVITLIFLYFGEADIKKDC 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,474
Number of Sequences: 438
Number of extensions: 2226
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)