Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D02
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O15802 Cluster: CG7; n=2; Plasmodium falciparum|Rep: CG...    34   3.5  
UniRef50_A0D345 Cluster: Chromosome undetermined scaffold_36, wh...    33   6.1  
UniRef50_Q5A7H2 Cluster: Putative uncharacterized protein ERD1; ...    27   6.8  

>UniRef50_O15802 Cluster: CG7; n=2; Plasmodium falciparum|Rep: CG7 -
            Plasmodium falciparum
          Length = 1281

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 54   KRGKIITERIYLSISIELSFYQQ*KYNNILLSHLHKYNYNAVS-INLIYSFNRVS 215
            K   II++  +  I+ EL ++++   NN+LL    KYN N  S I +IY   + S
Sbjct: 1003 KENVIISKTYFQQINQELKYFKENNKNNLLLLDTKKYNENVQSYIKMIYKNRKKS 1057


>UniRef50_A0D345 Cluster: Chromosome undetermined scaffold_36,
          whole genome shotgun sequence; n=1; Paramecium
          tetraurelia|Rep: Chromosome undetermined scaffold_36,
          whole genome shotgun sequence - Paramecium tetraurelia
          Length = 148

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 77 LCYYLTTFDSFCYKILQ 27
          LC+ LT+F SFCYKILQ
Sbjct: 7  LCFILTSFYSFCYKILQ 23


>UniRef50_Q5A7H2 Cluster: Putative uncharacterized protein ERD1;
           n=3; Saccharomycetales|Rep: Putative uncharacterized
           protein ERD1 - Candida albicans (Yeast)
          Length = 467

 Score = 27.5 bits (58), Expect(2) = 6.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 288 LLADTEYTFCWDFPMIFXLTYFINIYSVCIGR 383
           L  ++ Y+F WD  M + L  F  ++SV  G+
Sbjct: 311 LAVNSTYSFIWDIKMDWHLELFDGLFSVISGK 342



 Score = 24.2 bits (50), Expect(2) = 6.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 144 LSHLHKYNYNAVSINLIYSF 203
           L+HL+ + Y A+++N  YSF
Sbjct: 300 LNHLNNWLYFALAVNSTYSF 319


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,094,425
Number of Sequences: 1657284
Number of extensions: 9055707
Number of successful extensions: 22911
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22869
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)