Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D01
         (662 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TBZ7 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.1  
UniRef50_A3H9F4 Cluster: NMD3; n=1; Caldivirga maquilingensis IC...    33   8.1  

>UniRef50_A7TBZ7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 131

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -2

Query: 556 LRCRIFFFNFKCIFLYIFCNVYIIWK*LYVLCCLKXTYTLINLRHVYKLLLXISY 392
           +R R    N    + Y+ CN+YI ++ L    C++  Y + N+   Y+ L+   Y
Sbjct: 69  IRYRYLICNMYIRYRYLICNMYIRYRYLICNMCIRYRYLICNMYIRYRYLICNMY 123


>UniRef50_A3H9F4 Cluster: NMD3; n=1; Caldivirga maquilingensis
           IC-167|Rep: NMD3 - Caldivirga maquilingensis IC-167
          Length = 310

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 265 CLKIIHQSMFI-NIINVKICMFDLCYLITQ*WAKGLNKIEIFINTKLXIITYKRDVSL 435
           C ++ H+ + + N +NV +C     Y I   W++G+  +E  +++K+ +     D+S+
Sbjct: 24  CYRLTHRIIDVPNEVNVLMCYSCGAYFINGRWSRGIRSLEKLVSSKIRVKGIVSDMSI 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,557,836
Number of Sequences: 1657284
Number of extensions: 9237985
Number of successful extensions: 15828
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15793
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)