Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_D01
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022980-1|AAG24194.1|  346|Caenorhabditis elegans Serpentine re...    28   5.1  
Z72508-1|CAA96641.1|  342|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AF022980-1|AAG24194.1|  346|Caenorhabditis elegans Serpentine
           receptor, class h protein36 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 398 FVLIKISILFSPFAHYCVIK 339
           F+   I  LF PFAH+CV++
Sbjct: 20  FIYSSIITLFYPFAHFCVLR 39


>Z72508-1|CAA96641.1|  342|Caenorhabditis elegans Hypothetical
           protein F28H7.1 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -2

Query: 622 FLLLVFGIXINERLXXRFIPVPLRCRIFFFNFKCIFLYIFCNVYI 488
           FL   F +  N+ L   F+P  L   IF+  F  IF  I C  YI
Sbjct: 110 FLYRFFVLFNNQFLTRWFMPYGLLTSIFYLIFHVIFWTICCWKYI 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,730,229
Number of Sequences: 27780
Number of extensions: 236770
Number of successful extensions: 450
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)