Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C24
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -1

Query: 374 LQAYXXXXXXXXXKHNDYNHVIL**LSQPTQNPFTVKTEKNMK 246
           L A+          HND   V +  + Q  QNP T+   KN +
Sbjct: 436 LDAFLYWVDEILANHNDVYFVTMTQVIQWIQNPRTITESKNFE 478


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
 Frame = +1

Query: 100 TNLKHFNALTMTKYVIVTQK-IKFYKFII*XXXXXXXXXXXXXXXXXXXXXXXXXXXTVN 276
           T + H  A+T TK V+ +Q  IK+ K +I                              +
Sbjct: 263 TLMHHPVAMTGTKTVMPSQSAIKYRKQVILMLGTVVLAFFICLLPFRALTFWIIVAPAGS 322

Query: 277 GFWVGCDNYHNIT*L*SLCFH 339
            F +G +NY+NI     + FH
Sbjct: 323 NFEIGFENYYNILYFSRIMFH 343


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 165 FYFLCYYYVFC 133
           F+ LC YY +C
Sbjct: 141 FFLLCIYYFYC 151



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = -1

Query: 194 FKLHIMNL*NFIFCVTITYFVIVKALKCLRFVKNSVNVVSALFLFNQH 51
           FK + +    + +CV+IT+ V +  L C  +    +       +F  H
Sbjct: 48  FKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVH 95


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +3

Query: 156 ENKILQIHYMKF--EFGNIKFI--IISYFCGYIKFHIFFSFNSKWILGWL*QLS*YYVIV 323
           E K+  I  + +  E   +K +  +I++F  +     FF  N K ILG L  L  + ++V
Sbjct: 456 EQKVKNIQMLVYQNEAEEVKILLDVINHFPHFTAAR-FFDLNRKTILGVLNALFTFLIVV 514

Query: 324 I 326
           +
Sbjct: 515 V 515


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,518
Number of Sequences: 336
Number of extensions: 2865
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)