Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C24
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   2.5  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   4.4  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   4.4  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -1

Query: 152 VTITYFVIVKALKCLRFVKNSVNVVSALFLFNQHK 48
           V+   F ++  +K LR++ NS+   S LF   +++
Sbjct: 99  VSFRLFSVIGTVKYLRYLMNSITQQSELFSLGRYE 133


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 576 MCKSISIY*SEYVITLMALNDSLIKLSNTKKRTKIGSLCH 457
           +C+  S+Y S YV+ L+ + D  + +    K       CH
Sbjct: 261 LCQMFSLYLSTYVLVLVGV-DRWVAVKYPMKSLNTARRCH 299


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -3

Query: 576 MCKSISIY*SEYVITLMALNDSLIKLSNTKKRTKIGSLCH 457
           +C+  S+Y S YV+ L+ + D  + +    K       CH
Sbjct: 262 LCQMFSLYLSTYVLVLVGV-DRWVAVKYPMKSLNTARRCH 300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,929
Number of Sequences: 2352
Number of extensions: 10175
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)