Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C22
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    26   0.21 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   3.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.0  

>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -1

Query: 208 DVQANQMRWQQ----QLHSLPATWQVISLVPVCQSTVDVMLCVRAKFE 77
           ++QA+Q++W +     L S+P  +  I L  VC ST+  +      F+
Sbjct: 287 ELQASQIKWTRIAYMALASVPFIFDSIHLCDVCYSTIGTVSWCELNFD 334


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 526 RRSYWAKEVFSMVPVSII 579
           +RS+WA  +F ++  S+I
Sbjct: 135 KRSFWAVTIFLVLAASVI 152


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 555 EHLLGPV*SSYEHQCAFNLLSDD 487
           EHLLG + +    Q  FN+ S D
Sbjct: 133 EHLLGHLQTDLMGQSIFNITSPD 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,004
Number of Sequences: 336
Number of extensions: 2729
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)