Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C22
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 83 2e-16
SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 67 1e-11
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 64 6e-11
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 60 1e-09
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 58 5e-09
SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3) 57 1e-08
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 54 9e-08
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 53 2e-07
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 51 6e-07
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 50 2e-06
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 48 8e-06
SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 44 1e-04
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 40 0.002
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 34 0.076
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 34 0.076
SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_20643| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 31 0.53
SB_28773| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 31 0.93
SB_15626| Best HMM Match : adh_short (HMM E-Value=3.8e-05) 30 1.6
SB_34657| Best HMM Match : TMEM9 (HMM E-Value=2.9) 29 3.8
SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_38316| Best HMM Match : Syja_N (HMM E-Value=0.00032) 28 5.0
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_30907| Best HMM Match : THAP (HMM E-Value=0.0033) 28 6.6
SB_11981| Best HMM Match : CH (HMM E-Value=0.00075) 28 6.6
SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10) 27 8.7
SB_50745| Best HMM Match : CBM_10 (HMM E-Value=6.9) 27 8.7
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 101 bits (243), Expect = 3e-22
Identities = 63/166 (37%), Positives = 88/166 (53%), Gaps = 3/166 (1%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLE--SKGXXXXXXXXNG 423
L N G++ G IE S Q+D M+ NV+S++ +T +P + + S +
Sbjct: 88 LFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKMRQQGSGSIINMASVASS 147
Query: 422 IRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTE-LQRRGGLSEEQYA 246
I+ P AY SKA+V FT+ +A + KG+RVN V PG I TE LQ R + +
Sbjct: 148 IKGAPNRFAYGTSKAAVIGFTKAIAADYITKGIRVNAVCPGTIYTESLQYRIDSTPDPQK 207
Query: 245 AFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 108
A + GR GKP+EVA + FLASD +S ITG + VDGG
Sbjct: 208 ALADFLAR-QPTGRFGKPEEVANVVVFLASDESSFITGQCITVDGG 252
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 83.0 bits (196), Expect = 2e-16
Identities = 59/170 (34%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Frame = -3
Query: 596 LVNNXGIIETGT-IENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXX----XX 432
LVNN GI+ET +E LA++ R+ TNV + A+ + +G
Sbjct: 89 LVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQGGNGGAIVNLSS 148
Query: 431 XNGIRSFPG-VLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEE 255
PG + Y K ++D T +A E+A G+RVN V PGVI TE+ GG E
Sbjct: 149 AAARLGAPGEYIDYAAVKGAIDSMTLGLAKEVAADGIRVNAVRPGVIETEIHASGGEPER 208
Query: 254 QYAAFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGGR 105
+ R ++ +GR G EVA I +LAS+ AS +GA + V GGR
Sbjct: 209 -----VARVSQSVPMGRGGLAREVAEAILWLASEQASYTSGALLDVSGGR 253
>SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 68.1 bits (159), Expect = 5e-12
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = -3
Query: 407 GVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERT 228
G+ AY+ISK ++ T+ +A E A G+RVNCV PGVI T +E A ++
Sbjct: 35 GLGAYSISKTTLLGLTKALADECADIGIRVNCVAPGVIKTRFSAALWKNE----AMHQKV 90
Query: 227 KETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGGRHA 99
KE + R G +E+ ++FL SD AS ITG ++ + GG A
Sbjct: 91 KERIPMKRLGTSEEIGGAVSFLCSDQASYITGETIVIGGGMTA 133
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 66.9 bits (156), Expect = 1e-11
Identities = 43/162 (26%), Positives = 74/162 (45%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIR 417
LVNN G + N S ++ +++TN+ + A + G + +
Sbjct: 119 LVNNGGGQFLCPVSNMSYKGWNAVIDTNLNGTFLCCTEAYRLWMSEHGGSIVNIIVDFFK 178
Query: 416 SFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFL 237
+P + ++A V T +A+E G+R+N V PGVI +E +
Sbjct: 179 GYPNMAHTGAARAGVHNLTMSLAVEWISNGIRINNVAPGVIFSET----AAANYPIPDLF 234
Query: 236 ERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDG 111
E+ ++T R G+ +EV+ + FL S AS ITG+++ VDG
Sbjct: 235 EKIRQTLPAKRCGETEEVSGAVCFLLSPAASYITGSTIKVDG 276
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 66.5 bits (155), Expect = 2e-11
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
Frame = -3
Query: 419 RSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPG---------------VILTE 285
R+ P Y+ SK ++ T+C+AL+LA +RVN ++PG I T+
Sbjct: 193 RAQPVHWTYSSSKGAIISMTKCMALDLAKDHIRVNSLSPGWTYSPEVATILLVTYCIQTQ 252
Query: 284 LQRRGGLSEEQYAAFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGGR 105
+ R G + A + H L R G+P E+AA I+FL S+ AS IT A +PVDGGR
Sbjct: 253 VARAAG---DDRARWEPLWGPYHMLNRLGEPAEIAAAISFLCSEDASFITAADLPVDGGR 309
Query: 104 H 102
H
Sbjct: 310 H 310
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 64.5 bits (150), Expect = 6e-11
Identities = 40/99 (40%), Positives = 54/99 (54%)
Frame = -3
Query: 407 GVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERT 228
G Y SKA V+ T+ A+ELA G+R N + PG I T + R+ A E+
Sbjct: 417 GQANYAASKAGVEGLTKVCAIELARFGIRCNAILPGFIDTPMTRKVP------AHITEQI 470
Query: 227 KETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDG 111
K LGR G+P +A ++FLA D +S ITGAS+ V G
Sbjct: 471 KHFIPLGRFGQPSNIADVVSFLACDESSYITGASIDVTG 509
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 60.1 bits (139), Expect = 1e-09
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIR 417
+VNN GI G + ++ Q R+ + NV + +T +P L +S G G
Sbjct: 628 IVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLLKKSCGRIVNVASCAGKL 687
Query: 416 SFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVI---LTELQRRGGLSEEQYA 246
PG+ AY+ SK +V F+ + +E+ P GV V+ ++PG LT+ + E +
Sbjct: 688 PGPGLSAYSASKYAVQSFSDALRIEMRPFGVSVHIIDPGFFKTNLTDAHNQKRQLEGLWN 747
Query: 245 AFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGA 129
+R K+ + K E + + AS + GA
Sbjct: 748 GLDQRVKDEYGEDFYLKGQEAIDFMGWFASSNTEEVVGA 786
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 58.0 bits (134), Expect = 5e-09
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Frame = -3
Query: 596 LVNNXGII---ETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXN 426
LVNN E+G+++ + +++LM N+ ++L+ A PHL S G +
Sbjct: 97 LVNNASQFCPTESGSVQEET---WNKLMGVNLSFPFFLSQAAFPHLKRSHGSIINMIDIH 153
Query: 425 GIRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYA 246
R Y +SKA + T+ +A + AP VRVN V+PG I+ G SEE+ A
Sbjct: 154 AERPLANHSVYCVSKAGLHMCTQALAKDFAP-DVRVNGVSPGFIMVP----GDWSEEKEA 208
Query: 245 AFLERTKETHALGRPGKPDEVAATIAFLA 159
L+ LGR G+ ++ + +LA
Sbjct: 209 EILKNV----PLGRQGELADITEAVLYLA 233
>SB_6559| Best HMM Match : adh_short (HMM E-Value=4.3)
Length = 253
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Frame = -3
Query: 410 PGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTEL-----QRRGGLSEEQYA 246
PG +K ++ R A LAP+G+ VN V PG I+++ + GG+S E
Sbjct: 148 PGYAITAQAKGCMELLVRYYAQVLAPRGITVNAVIPGYIMSDAWHNMTRAMGGVSAEPVQ 207
Query: 245 AFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGGRH 102
++ T + R G+ E + ++FL S AS ITG ++PVDGG H
Sbjct: 208 KRIQSTP----MRRFGEGREFSQVVSFLCSPRASFITGVALPVDGGLH 251
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/114 (24%), Positives = 56/114 (49%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIR 417
+VNN GI G ++ + ++ + + N+ + +T +P + ++G G
Sbjct: 20 VVNNAGIAGVGPVDWIPVERFKHVADINLWGLVDVTKTFLPLVKRARGRIVNVTSIAGRF 79
Query: 416 SFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEE 255
+ P Y++SK + F+ + ELAP G+ V+ V PG T++ R L+++
Sbjct: 80 TLPFASPYSVSKYGAEAFSDAIRRELAPFGISVSIVEPGFFRTKMPTRENLTQQ 133
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/103 (29%), Positives = 50/103 (48%)
Frame = -3
Query: 590 NNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSF 411
NN G + +E L Y R+ + N+ + +T +P + ++G GI
Sbjct: 26 NNAGFMTLAPLEWFPLDDYKRMADVNLWGLVDVTKTFLPLVKMARGRVVNVSSIAGIVVV 85
Query: 410 PGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTEL 282
P + AY+I+K V+ F+ + E++P GVRV + PG T L
Sbjct: 86 PSMAAYSITKYGVEAFSDALRREMSPWGVRVIIIEPGGFKTPL 128
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 54.0 bits (124), Expect = 9e-08
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESK--GXXXXXXXXNG 423
LVNN G + + + ++ ++ +V + + +A +++ G +
Sbjct: 120 LVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHE 179
Query: 422 IRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAA 243
P AY +K ++ T+ +ALEL + VN V PG I T + G+ +
Sbjct: 180 HTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPM---NGMDDSDVKP 236
Query: 242 FLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 108
E + L R G E+A+ + +L S+ A+ TG S+ VDGG
Sbjct: 237 DAE---PSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDGG 278
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/104 (29%), Positives = 47/104 (45%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIR 417
LVNN G+ G +E ++ +Y ++ N+ +T +P L KG G+
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREKGRVVNISSVAGMV 100
Query: 416 SFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTE 285
AY ISK V F+ + E++P GV V V PG T+
Sbjct: 101 PLQRSSAYCISKFGVSVFSDALRREMSPWGVGVVLVEPGAFKTQ 144
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 51.2 bits (117), Expect = 6e-07
Identities = 26/102 (25%), Positives = 50/102 (49%)
Frame = -3
Query: 560 IENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSFPGVLAYNISK 381
+E T L++Y ++ + N+ + +T+ +P + + G G S P Y+++K
Sbjct: 5 VELTPLSEYKKMADVNLWGLIDVTLTFLPLIRKCGGRVVNISSIAGRLSIPNTGPYSVTK 64
Query: 380 ASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEE 255
V+ F+ + E++P GV+V V PG T G L ++
Sbjct: 65 YGVEAFSDALRREVSPWGVKVTLVEPGGFHTRFLAEGALEKK 106
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = -3
Query: 596 LVNNXGIIETG-TIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESK-GXXXXXXXXNG 423
L+NN G + G +E + +++ N ++ LT +PH++E K G G
Sbjct: 133 LINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKAVLPHMIERKNGHIVVTSSVAG 192
Query: 422 IRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQ 279
P +YN +K +V + + +EL PK + V V PG + T ++
Sbjct: 193 KIGAPMSTSYNATKFAVQGYFDGLRVELFPKNIHVTLVCPGPVRTAIR 240
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 47.6 bits (108), Expect = 8e-06
Identities = 32/116 (27%), Positives = 53/116 (45%)
Frame = -3
Query: 458 KGXXXXXXXXNGIRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQ 279
+G +G G +AY +K +++ T +A +LA G+RVN ++PG+ T +
Sbjct: 424 RGVIVNVSSIHGTEGQSGKVAYAATKGAINAMTLPMARDLAKLGIRVNTISPGIFNTPMF 483
Query: 278 RRGGLSEEQYAAFLERTKETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDG 111
G E + A TK R GKP+E A + + + I G + +DG
Sbjct: 484 MAGRTKESREAI----TKSVPFPRRTGKPEEFAQLVQAVIEN--PMINGEIIRIDG 533
>SB_15825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 47.6 bits (108), Expect = 8e-06
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = -3
Query: 404 VLAYNIS-KASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERT 228
V++Y I K ++ TR +A++ A GVRVN ++ G +LT L + Y ++
Sbjct: 55 VVSYFIMCKGAITSMTRALAIDEAAYGVRVNSLSIGNVLTPLWESNASATPDYKKAIQDG 114
Query: 227 KETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDGG 108
+ LGR G E +LA+D A+ TG + + GG
Sbjct: 115 MDAQLLGRMGTLHESGQACLYLAAD-ATFTTGTDLLLTGG 153
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Frame = -3
Query: 563 TIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESK----GXXXXXXXXNGIRSFPGVL- 399
T E +L +++++ N + + L +++++ G + +F G +
Sbjct: 111 TGEAHALDLFEKVLKVNTTGSFNVIRLVAEQMIKNEPTEGGERGVITNTASVAAFDGQMG 170
Query: 398 --AYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLSEEQYAAFLERTK 225
AY+ SK + T +A +LA G+RVN + PG+ LT L L E+ A K
Sbjct: 171 QAAYSASKGGIVGMTLPIARDLARNGIRVNTIAPGLFLTPLLE--SLPEKVRIAL---AK 225
Query: 224 ETHALGRPGKPDEVAATIAFLASDLASNITGASVPVDG 111
R G PDE A + + + N G ++ +DG
Sbjct: 226 TVPFPPRLGHPDEYAHLVQSVMENPMMN--GETIRIDG 261
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/103 (24%), Positives = 47/103 (45%)
Frame = -3
Query: 590 NNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSF 411
NN G + +E L Y R+ + N+ + ++ +P + ++G G+ +
Sbjct: 469 NNAGYMTLAPLEWFPLDDYKRMADVNLWGLVDVSKTFLPLVKMARGRVVNVASTVGLIAN 528
Query: 410 PGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTEL 282
Y+I+K V+ F+ + E+ P GVRV+ + P T L
Sbjct: 529 ELTAPYSITKYGVEAFSDVLRREMFPWGVRVSIIEPQAFKTPL 571
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = -3
Query: 545 LAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSFPGVLAYNISKASVDQ 366
L Y R+ + N+ + +T +P + ++G G+ + Y+I+K V+
Sbjct: 11 LDDYKRMADVNLWGLVDVTKTFLPLVKMARGRVVNVSSIVGLIANELTAPYSITKYGVEA 70
Query: 365 FTRCVALELAPKGVRVNCVNPGVILTEL 282
F+ + E+ P GVRV+ + P T L
Sbjct: 71 FSDVLRREMLPWGVRVSIIEPQAFKTPL 98
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = -3
Query: 545 LAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIRSFPGVLAYNISKASVDQ 366
L Y R+ + N+ + +T +P + ++G G+ + Y+I+K V+
Sbjct: 177 LDDYKRMADVNLWGLVDVTKTFLPLVKMARGRVVNVASIVGLIAGELTAPYSITKYGVEA 236
Query: 365 FTRCVALELAPKGVRVNCVNPGVILTEL 282
F+ + E+ P GVRV+ + P T L
Sbjct: 237 FSDVLRREMLPWGVRVSIIEPQAFKTPL 264
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = -3
Query: 425 GIRSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGL 264
G S P + Y ISK +V+ F+ + LEL P GV+V V PG TE+ + L
Sbjct: 35 GYISVPSIGVYCISKFAVEAFSSALRLELEPWGVKVIVVEPGGYRTEMTHKHNL 88
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -3
Query: 362 TRCVALELAPKGVRVNCVNPGVILTELQRRGGLSE-EQYAAFLERTKETHALGRPGKPDE 186
T+ +A E G+R N + PG I T +G S + AF E GR G+ +E
Sbjct: 2 TKSLAAEWGRYGMRFNAIAPGPIET----KGAFSRLDPTGAFRSHAIERIPTGRFGEINE 57
Query: 185 VAATIAFLASDLASNITG 132
+A A+L SD AS ITG
Sbjct: 58 IANLAAYLVSDYASWITG 75
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESK-GXXXXXXXXNGI 420
+VNN GI+ +I S +D + +++ + +T A PH+ + K G +GI
Sbjct: 97 VVNNAGILRDKSILRMSELDWDLVQRVHLKGSFLVTRAAWPHMKKQKFGRIIMTTSTSGI 156
Query: 419 RSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNP 303
G Y+ +K + + +A E A ++ N + P
Sbjct: 157 YGNFGQANYSAAKLGLVGLSNTLAQEGAKYNIKCNAIAP 195
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLL-ESKGXXXXXXXXNGI 420
LVNN G+ G +E +++ + N N + LT +P + G GI
Sbjct: 281 LVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLTKAVIPKMKGNPSGHIINIPSIGGI 340
Query: 419 RSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILT 288
R P Y SK +V+ +A LAP ++ V PG + T
Sbjct: 341 RGVPFNAIYCSSKFAVEG----MAESLAPLLRKITNVEPGPVKT 380
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKGXXXXXXXXNGIR 417
L NN G + G +E ++ Y + N+ + +T +P + +KG G+
Sbjct: 114 LDNNAGYMGLGPLEWFTMDDYKMQADINLWGLIDVTKTFLPLIKVAKGRVVNFSSIAGVA 173
Query: 416 SFPGVLAYNISKASVDQFTRCVALELAP 333
+ AY+++K V+ F+ + E+AP
Sbjct: 174 TPALRAAYSVTKYGVESFSDALRREMAP 201
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 34.3 bits (75), Expect = 0.076
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHL-LESKGXXXXXXXXNGI 420
LVNN GI G +E + + NTN + ++ +P + + G G
Sbjct: 88 LVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKSDHSGHIINISSTAGH 147
Query: 419 RSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGL 264
P Y SK +V+ + +A L GV+ ++ T L G +
Sbjct: 148 TGMPFTGLYCASKFAVEGLSESLAPLLRKFGVKFALSTGYLVSTRLVIMGAV 199
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 34.3 bits (75), Expect = 0.076
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = -3
Query: 419 RSFPGVLAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRR 273
++FPG+ Y+ +K V+ ++ + E+A GV+V + PG+ ++ R
Sbjct: 214 KAFPGLAIYSGTKFFVEALSQGLRQEIAGSGVKVTTIQPGIATSDRMSR 262
>SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 353 VALELAPKGVRVNCVNPGVI 294
+A+E P+GVRVNCV PG I
Sbjct: 7 LAVEWGPQGVRVNCVAPGPI 26
>SB_20643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 395 YNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQR 276
Y SK ++ FTR +A L GV ++PG+I+T+ R
Sbjct: 45 YGNSKLAIILFTRELAKRLKDTGVTTYSLHPGIIMTDFAR 84
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 395 YNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQR 276
Y SK ++ FTR +A L GV ++PG+I+T+ R
Sbjct: 202 YGNSKLAIILFTRELAKRLKDTGVTTYSLHPGIIMTDFAR 241
>SB_28773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 398 AYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTE 285
AY ISK V F+ + E++P GV V V PG T+
Sbjct: 9 AYCISKFGVSVFSDALRREMSPWGVGVVLVEPGAFKTQ 46
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKG 453
LVNN GI++ G ++ SL + + N+ + +T +P L ++KG
Sbjct: 123 LVNNAGILQVGPLDWQSLDSIKQTADVNLWGLIDVTKTFLPLLKKAKG 170
>SB_15626| Best HMM Match : adh_short (HMM E-Value=3.8e-05)
Length = 426
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 596 LVNNXGIIETGTIENTSLAQYDRLMNTNVRSIYYLTMLAVPHLLESKG 453
LVNN G ++ G IE L+ Y + + N+ + +T +P + ++ G
Sbjct: 136 LVNNAGTLDVGPIEWLPLSSYKHVADVNLWGMIDVTKAFLPLVQQAHG 183
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 398 AYNISKASVDQFTRCVALELAPKGVRVNCVNP 303
AY ISK ++ F+ + E+ P GV+V+ V P
Sbjct: 234 AYVISKYGIEAFSDALRREMRPFGVKVSIVEP 265
>SB_34657| Best HMM Match : TMEM9 (HMM E-Value=2.9)
Length = 404
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 408 RERANPINTRYVYNIPFAFEEMRDRQHR 491
R + I T YV++IP +EEM D+ +R
Sbjct: 208 RSSSTIIATLYVFSIPTLYEEMLDKSYR 235
>SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1675
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 308 NPGVILTELQRRGGLSEEQYAAFLERTKET-HALGRPGKPDEVAATIAFLASDLA 147
N V++ E +++GG+ E LER K+T + L KP ++AT F+ L+
Sbjct: 1204 NTQVLVNEFRKKGGIGEILQGKLLERAKKTDNWLNAMSKP-VMSATGKFMPRHLS 1257
>SB_38316| Best HMM Match : Syja_N (HMM E-Value=0.00032)
Length = 567
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Frame = +3
Query: 171 NCCCHL--IWFAWTSQCMS 221
N CC + +WF WT CMS
Sbjct: 353 NTCCTVLRVWFTWTGCCMS 371
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -3
Query: 401 LAYNISKASVDQFTRCVALELAPKGVRVNCVNPGVILTELQRRGGLS 261
+ Y SK + FT ++ L P+GV VN + PG++ T L R +S
Sbjct: 235 VGYGRSKLANFLFTHELSKRL-PQGVTVNALCPGMVWTGLGRTSKMS 280
>SB_30907| Best HMM Match : THAP (HMM E-Value=0.0033)
Length = 892
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 229 LKKLMHWDVQANQMRWQQQLHSLPATWQVISLVPVC--QSTVDVMLCVRAKFELLT 68
+K+L+HWD + + +W+ L L + + VC ST + +++K + +T
Sbjct: 29 IKQLLHWDEKQSVFKWKGNLEQLQEFCLKVLNLEVCATMSTSERSSSLKSKSKTVT 84
>SB_11981| Best HMM Match : CH (HMM E-Value=0.00075)
Length = 823
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 583 PVLLKLEPSRTPPWPSMIV 527
PV++K P RTPPW ++
Sbjct: 241 PVVIKPSPRRTPPWQEQLL 259
>SB_13832| Best HMM Match : LRR_1 (HMM E-Value=5.4e-10)
Length = 637
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 128 WHQ*YYLPSRWQGMQLLLP 184
W YLPS W+ +Q++LP
Sbjct: 39 WRNIVYLPSLWKNVQVILP 57
>SB_50745| Best HMM Match : CBM_10 (HMM E-Value=6.9)
Length = 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 420 SLFPWSSGIQHLQSIC*PIHSLCCFRI-GTERS 325
SLF + GI+ L +C SLCC I G E+S
Sbjct: 189 SLFSFPMGIEALSYLCALTSSLCCVDIPGDEKS 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,671,756
Number of Sequences: 59808
Number of extensions: 381459
Number of successful extensions: 858
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -