Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C21
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.41 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.54 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = -1

Query: 259 LSALTVPPRMPHLEDLIAREFTHFNGYAYEPNDEKRMEYPDDMHISNMFRSCVEVRYGEP 80
           LS L  PP + H ED++ ++ ++F      P  +  ++   DM   ++ R     R+   
Sbjct: 289 LSGLKAPPGVEHFEDVVHKKCSNFT----LPEIQHNLDVLVDMCEQDIIRIDRNTRF--- 341

Query: 79  NQDK 68
           NQDK
Sbjct: 342 NQDK 345


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 489 LMLLLRNETVTLNMQLV*YALTRN 418
           L+L+L+N  VTLN+QL    LT+N
Sbjct: 544 LVLMLKNRFVTLNVQLT--KLTKN 565


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -1

Query: 238 PRMPHLEDLIAREFTHFNGYAYEPNDEKRMEYPDDMHISN 119
           PR P  + +  R   ++         E R + P  MH++N
Sbjct: 81  PRFPPYDRMDIRAAGYYGPQQQMDGQEYRPDSPSSMHMAN 120


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 385  DPSRGLFPYIYVSCECISY 441
            DP   + PY Y+S + +SY
Sbjct: 2619 DPQGRIGPYAYLSNQWVSY 2637


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 13/57 (22%), Positives = 26/57 (45%)
 Frame = -1

Query: 661 LDNVNQSHLSYLRNEVDLANYPELSYNALHCSHARLLSSLSYLANTIHITASDRYMF 491
           LDN++++HL  +R    LA     + N  + +    ++ L + A    +   D  M+
Sbjct: 186 LDNMSRNHLFLVRRTETLAQILNQTVNFYNSAFGWPIAFLIFFATLDFLDNVDTIMY 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,227
Number of Sequences: 336
Number of extensions: 3821
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)