Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C21
         (808 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82080-3|CAD92380.1|  200|Caenorhabditis elegans Hypothetical pr...    35   0.079
Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>Z82080-3|CAD92380.1|  200|Caenorhabditis elegans Hypothetical
           protein W09G3.3 protein.
          Length = 200

 Score = 34.7 bits (76), Expect = 0.079
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
 Frame = -1

Query: 475 KKRNSYIKYAVGMICTHKKHKYTGIIRGWDLIWAADWK----EHGEALNRLEFGHNQPFY 308
           + R  ++++ VG + TH K  + G+I GWD    A  K     HGE  N       QP Y
Sbjct: 84  RHRAPHVEFRVGDVITHTKLNFRGVIIGWDEHAIAPEKFLKVAHGENKNYA----TQPNY 139

Query: 307 YLIIANQSS-----RYVAQENL 257
            ++I  +        Y+ QENL
Sbjct: 140 AVLIDTRDRLTPQLSYIVQENL 161


>Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical
           protein C17E4.3 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 358 HGEALNRLEFGHNQPFYYLIIANQSSRYVAQENLSALTVPPRMPHLEDLIA 206
           H E+ N + FG   P   + ++  S+  +  E L  LT+ P    L+DL A
Sbjct: 277 HDESRNEIPFGRRTPEQAICVSMSSTPQMYAEKLEKLTLSP--IGLDDLFA 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,563,045
Number of Sequences: 27780
Number of extensions: 358138
Number of successful extensions: 1017
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)