Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C20
         (397 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   5.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   7.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 124 STTWDGSLRSASVTSGVSCKQSSRNKP 204
           S TW  SLR+A +   +S  +   + P
Sbjct: 270 SNTWQNSLRAADIQPTLSSIRHPESNP 296


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   TCSTIGVXSRESSSYFVH 54
           TC+  GV   +  S+F+H
Sbjct: 500 TCNMCGVECSDKVSFFLH 517


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 3   LLNNWGSVSGIFFIFCPLFFR*DC 74
           L++N   VS IF   C L    DC
Sbjct: 236 LISNISLVSLIFLFNCTLIIMCDC 259


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 282 HHGSCSKSHFIDSQIYDFN 338
           +  S  K+   D Q+Y FN
Sbjct: 58  YFASLEKNPLFDGQLYSFN 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,350
Number of Sequences: 336
Number of extensions: 1975
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)