Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C20
(397 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32470.2 68417.m04623 ubiquinol-cytochrome C reductase comple... 49 1e-06
At4g32470.1 68417.m04622 ubiquinol-cytochrome C reductase comple... 49 1e-06
At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase comple... 46 1e-05
At1g13420.1 68414.m01566 sulfotransferase family protein similar... 33 0.052
At5g28150.1 68418.m03402 expressed protein 30 0.64
At4g10320.1 68417.m01697 isoleucyl-tRNA synthetase, putative / i... 28 2.0
At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containi... 28 2.6
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 27 3.4
At1g21600.1 68414.m02700 expressed protein similar to hypothetic... 27 3.4
At4g30020.1 68417.m04272 subtilase family protein contains simil... 27 4.5
At3g03360.1 68416.m00334 F-box family protein low similarity to ... 27 4.5
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 27 4.5
At5g64220.1 68418.m08067 calmodulin-binding protein similar to a... 27 6.0
At3g14570.1 68416.m01845 glycosyl transferase family 48 protein ... 26 7.9
At3g11900.1 68416.m01459 amino acid transporter family protein l... 26 7.9
>At4g32470.2 68417.m04623 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 101
Score = 48.8 bits (111), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -3
Query: 209 KYGLLRDDCLHE--TPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKE 57
+YGL DD + + D+ EA+ RLP VVD RN R+ RA+ LSM+ LPK+
Sbjct: 30 RYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKD 82
>At4g32470.1 68417.m04622 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 48.8 bits (111), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -3
Query: 209 KYGLLRDDCLHE--TPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKE 57
+YGL DD + + D+ EA+ RLP VVD RN R+ RA+ LSM+ LPK+
Sbjct: 30 RYGLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLPKD 82
>At5g25450.1 68418.m03023 ubiquinol-cytochrome C reductase complex
14 kDa protein, putative similar to SP|P48502
Ubiquinol-cytochrome C reductase complex 14 kDa protein
(EC 1.10.2.2) (CR14) {Solanum tuberosum}; contains Pfam
profile PF02271: Ubiquinol-cytochrome C reductase
complex 14kD subunit
Length = 122
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = -3
Query: 209 KYGLLRDDC---LHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILP 63
+YGL DD L++ D+ EAL RLP +VD RN R++RA+ LSM+ LP
Sbjct: 30 RYGLRYDDLYDPLYDL-DIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLP 80
>At1g13420.1 68414.m01566 sulfotransferase family protein similar to
steroid sulfotransferase 1 GI:3420004 from (Brassica
napus); contains Pfam profile PF00685: Sulfotransferase
domain
Length = 331
Score = 33.5 bits (73), Expect = 0.052
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -1
Query: 157 KHSADFHPMLLTRETSVLYVPYSSPCKKQSYLKKSGQNMKKIPETEPQLLS 5
KH++D HP LLT L VPY + YLK S ++ K+P + P+L S
Sbjct: 98 KHTSDNHP-LLTHNPHEL-VPY---LELDLYLKSSKPDLTKLPSSSPRLFS 143
>At5g28150.1 68418.m03402 expressed protein
Length = 289
Score = 29.9 bits (64), Expect = 0.64
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 34 SSSYFVHSSLGRIVFCMESCMARTIRKFLSSTTWDGSLRSASVTSGV--SCKQS 189
SSS + +V C+ C R R L + TW +L SVT GV SC QS
Sbjct: 19 SSSSNSGKNAQNLVTCIYQCRIRG-RNCLITVTWTKNLMGQSVTVGVDDSCNQS 71
>At4g10320.1 68417.m01697 isoleucyl-tRNA synthetase, putative /
isoleucine--tRNA ligase, putative similar to SP|P41252
Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)
(Isoleucine--tRNA ligase) (IleRS) (IRS) {Homo sapiens};
contains Pfam profile PF00133: tRNA synthetases class I
(I, L, M and V)
Length = 1190
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 100 VPYSSPCKKQSYLKKSGQNMKKIPETE 20
+PYS+ CK ++GQN K++P+ E
Sbjct: 180 MPYSTGCKTPLSNFEAGQNYKEVPDPE 206
>At1g74600.1 68414.m08641 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 895
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 236 WAYNLSGFNKYGLLRD 189
WA +SGFN+YG LR+
Sbjct: 519 WASMISGFNEYGYLRE 534
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 191 DDCLHETPDVTEALRR-LPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKY 42
DD +H E RR +PS ++ +IVRAI+ K P+EE Y
Sbjct: 242 DDAIHPLSSAPEPKRRFIPSKWEAKKVVKIVRAIRKGWIKFDKPEEEPNVY 292
>At1g21600.1 68414.m02700 expressed protein similar to hypothetical
protein GB:AAD41412 GI:5263310 from [Arabidopsis
thaliana]
Length = 328
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 116 NFRIVRAIQLSMQKTILPKEEWTKYEED 33
+F+I+ + T++ +EEWTK ED
Sbjct: 284 SFKIIHVGERDDPTTVIEREEWTKTRED 311
>At4g30020.1 68417.m04272 subtilase family protein contains
similarity to meiotic serine proteinase TMP GI:6468325
from [Lycopersicon esculentum]
Length = 816
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 200 LLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEW 51
L+ H +PD E LRR P +R++++ + + Q LP + W
Sbjct: 92 LINGFAAHVSPDQAEMLRRAPGVKSVDRDWKVRKLTTHTPQFLGLPTDVW 141
>At3g03360.1 68416.m00334 F-box family protein low similarity to
ribosomal RNA apurinic site specific lyase [Triticum
aestivum] GI:6505722; contains F-box domain Pfam:PF00646
Length = 481
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 115 TSVLYVPYSSPCKKQSYLKKSGQNMKKIPETEPQLL 8
+S ++ S C SYLK++G + ++P+ QL+
Sbjct: 15 SSTVFSSSKSTCASPSYLKEAGDLISRLPDDILQLI 50
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 110 GSFSRQQHGMEVCGVLQLHQEFHASN 187
GS Q+ ME C VLQ +EF SN
Sbjct: 217 GSVELQRLKMETCEVLQYRREFDRSN 242
>At5g64220.1 68418.m08067 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1050
Score = 26.6 bits (56), Expect = 6.0
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 140 EVCGVLQLHQEFHASNHP 193
E+C +L+ HQ+FH ++ P
Sbjct: 31 EICEILRNHQKFHIASEP 48
>At3g14570.1 68416.m01845 glycosyl transferase family 48 protein
contains similarity to glucan synthases
Length = 1973
Score = 26.2 bits (55), Expect = 7.9
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = +3
Query: 15 WGSVSGIFFIFCPLFFR*DCFLHGELYGTYNTEVSLVNNMGWKSAECFSYIRSFMQAIIP 194
W + ++F+ +++ C + G LYG + + + +G + +F ++IP
Sbjct: 752 WAPIMVVYFMDTQIWYSVYCTIFGGLYGVLH-HLGEIRTLGMLRGRFHTLPSAFNASLIP 810
Query: 195 *QTIFIESRK-------IVGPFAEAVTSVNSRGSESHHGSCSKSHFIDSQI 326
T + RK +G F + V +GS+ S +K + +Q+
Sbjct: 811 HSTKDEKRRKQRGFFPFNLGRFHKKVVYFALQGSDGQKNSMAKFVLVWNQV 861
>At3g11900.1 68416.m01459 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 432
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 6 LNNWGSVSGIFFIFCPLFFR*DCFLHGELYGTYNTEVSL 122
LN W +F + C L F +YGTYNT V +
Sbjct: 402 LNVWNKSIDVFIVICGLIF--------AVYGTYNTIVGV 432
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,814,937
Number of Sequences: 28952
Number of extensions: 170645
Number of successful extensions: 475
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 565902384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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