Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C17
(817 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 396 e-109
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 384 e-105
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 268 9e-71
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 251 1e-65
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 210 3e-53
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 198 1e-49
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 182 1e-44
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 152 1e-35
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 133 4e-30
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 114 3e-24
UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep: ... 113 4e-24
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 109 8e-23
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 105 1e-21
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 101 2e-20
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 100 4e-20
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 100 4e-20
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 100 4e-20
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 97 4e-19
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 96 1e-18
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 93 6e-18
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 89 2e-16
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 87 5e-16
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 85 2e-15
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 80 6e-14
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 67 4e-10
UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S riboso... 66 1e-09
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ... 37 0.70
UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clost... 35 2.8
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.9
UniRef50_A6BE46 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ... 33 6.5
UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11; Bacteri... 33 8.6
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 396 bits (976), Expect = e-109
Identities = 179/246 (72%), Positives = 209/246 (84%)
Frame = -1
Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 587
+WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+NGGT+ +K+
Sbjct: 136 KWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLD 195
Query: 586 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIG 407
WARE LE+ +PV+ VF QDEMID I TSRWHTKKLPRKTH+GLRKVACIG
Sbjct: 196 WARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIG 255
Query: 406 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 227
AWHP+RV+F+VARAGQKGYHHRTE+NKKIY+IGQG KDGK+IKNNAST+YDLS+KSI
Sbjct: 256 AWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSIN 315
Query: 226 PMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
P+GGF HYGEV NDFVM+KGC +G KKR++TLRKSL V TKR ALEKI+LKFIDT+SKFG
Sbjct: 316 PLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFG 375
Query: 46 HGRFQT 29
HGRFQT
Sbjct: 376 HGRFQT 381
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 384 bits (945), Expect = e-105
Identities = 173/245 (70%), Positives = 201/245 (82%)
Frame = -1
Query: 763 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 584
W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHIMEIQLNGGT+ +KV W
Sbjct: 137 WRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAW 196
Query: 583 AREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGA 404
A+ LEK +PV SVF+Q E+ID I TSRWHTKKLPRKTHKGLRKVACIGA
Sbjct: 197 AQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGA 256
Query: 403 WHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITP 224
WHP+RV ++ARAGQKGYHHRTE+NKKI+RIG+G H +DGK++KNNAST YD++ KSITP
Sbjct: 257 WHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITP 316
Query: 223 MGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGH 44
+GGFPHYGEVNNDFVM+KGC G KKR+ITLRKSL VH R A+E I LKFIDT+SKFGH
Sbjct: 317 LGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGH 376
Query: 43 GRFQT 29
GRFQT
Sbjct: 377 GRFQT 381
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 268 bits (658), Expect = 9e-71
Identities = 128/243 (52%), Positives = 163/243 (67%), Gaps = 3/243 (1%)
Frame = -1
Query: 748 GRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ---KKAHIMEIQLNGGTIEDKVKWAR 578
GR + + K + ++RV+AHTQ++ L+ + KKAH+ EIQ+NGGTI K++ A+
Sbjct: 193 GRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAK 252
Query: 577 EHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWH 398
LEK + +DSVF Q E D RW LPRKTH+GLRKVACIGAWH
Sbjct: 253 SLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLPRKTHRGLRKVACIGAWH 312
Query: 397 PSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMG 218
PSRV +TVARAGQ GYHHRT +NKKIY++G+ + + N A+T YDL+ K+ITPMG
Sbjct: 313 PSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSME-----PNQATTAYDLTAKTITPMG 367
Query: 217 GFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGR 38
GF YG V ND+VM+KG GP++R+ITLR+ + T R EKI LKFIDTSSK GHGR
Sbjct: 368 GFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTEKITLKFIDTSSKIGHGR 427
Query: 37 FQT 29
FQT
Sbjct: 428 FQT 430
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 251 bits (615), Expect = 1e-65
Identities = 119/174 (68%), Positives = 137/174 (78%)
Frame = -1
Query: 544 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 365
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 364 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 185
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 184 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 23
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTA 332
Score = 52.8 bits (121), Expect = 1e-05
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -1
Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 668
+WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 136 KWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 210 bits (513), Expect = 3e-53
Identities = 116/242 (47%), Positives = 154/242 (63%)
Frame = -1
Query: 754 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 575
++G++ +E +FK M +YC V+ ++AHTQM LL QKKAH+MEIQ+ G + W RE
Sbjct: 134 DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHLMEIQVMGHC---GLSW-RE 189
Query: 574 HLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHP 395
+ QDE+ID I T + P + +G K+ C+GAWHP
Sbjct: 190 AVN----------QDEIIDVIKETKGNGYKGVTRVDIQRNCPERPIEGCPKL-CVGAWHP 238
Query: 394 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGG 215
+RV+F+VA+ GQKGYHH + NKKI +IGQG KDGK+IKNNA TEY LS+KSI +GG
Sbjct: 239 ARVTFSVAQVGQKGYHHNGD-NKKICKIGQGYLIKDGKLIKNNAPTEYHLSDKSINLLGG 297
Query: 214 FPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRF 35
F HYGEV NDF+ +KGC + KK +T+ K L V T + AL+KI+ K DT+ K GHG F
Sbjct: 298 FVHYGEVTNDFIRLKGCAVRTKKH-LTICKYLLVQTIQWALKKIDPKLNDTTYKVGHGCF 356
Query: 34 QT 29
QT
Sbjct: 357 QT 358
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 198 bits (484), Expect = 1e-49
Identities = 108/217 (49%), Positives = 142/217 (65%)
Frame = -1
Query: 682 AHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXX 503
A TQM LL QKKAH+ E Q+N G + K+ WA + LE+ +PV+ +F + I
Sbjct: 121 ALTQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTT 178
Query: 502 XXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKK 323
+S W+TKK+P KTH+ + ACI W +VA A QKG HH T +NKK
Sbjct: 179 KGKHYKGISSHWYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKK 231
Query: 322 IYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKR 143
IY+IGQG K+GK+IKNNAST+Y KSI+P+GG H G+V NDFVM+K C +G KKR
Sbjct: 232 IYKIGQGYLIKNGKIIKNNASTDYT---KSISPLGGCIHCGKVTNDFVMLKDCLVGTKKR 288
Query: 142 IITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQ 32
+++L KSL + TK+ L+K+N KFIDT+SKFGHG FQ
Sbjct: 289 VLSLCKSLLMRTKQQTLQKVNFKFIDTTSKFGHGCFQ 325
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 182 bits (443), Expect = 1e-44
Identities = 96/231 (41%), Positives = 143/231 (61%)
Frame = -1
Query: 715 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFA 536
+I++ + R + T +K +KK + E + GG+ + K+++ + K I ++S+F
Sbjct: 136 IIKHSVIFRFLCCTFIKTNSMIKKK-YFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFH 194
Query: 535 QDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQK 356
++++ID I SRW +LPRKTH+GLRKVACIG W PSRV++T++RAGQK
Sbjct: 195 ENDIIDAIGITKGHGTKGVVSRWGITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQK 254
Query: 355 GYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVM 176
GYH RT NKKIY+IG +++ N+ S D KS+ MGGF +G +NND+++
Sbjct: 255 GYHKRTLFNKKIYKIGS---EENFSYYSNSLS---DSIVKSVNCMGGFKKFGFINNDYLI 308
Query: 175 IKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPA 23
IKG G KR I LRK+++ EKI LK++DTSSK GHGR+++ A
Sbjct: 309 IKGSMTGSSKRPILLRKNIKNKISSVITEKIILKYVDTSSKRGHGRYESSA 359
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 152 bits (368), Expect = 1e-35
Identities = 83/214 (38%), Positives = 121/214 (56%)
Frame = -1
Query: 694 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 515
VR I TQ ++K + KK +ME + G ++E+K + +E L K + V V + E++D
Sbjct: 163 VRAIVATQPWVIKLK-KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDV 221
Query: 514 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 335
I RW K K KG RKV IG WHP+RV +TV AGQ G+HHRTE
Sbjct: 222 IAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTE 281
Query: 334 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 155
+NK++ IG+ +GK +K + +TE + ITP GGFPHYG V +DF+MI G G
Sbjct: 282 LNKRLIAIGE-----NGK-LKLDENTEIE-----ITPKGGFPHYGIVRSDFMMIAGSVPG 330
Query: 154 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSK 53
KRII +R ++R K+ +++ + ++ SK
Sbjct: 331 AIKRIIRVRPAIRPPKKKPPVQRPQITYVSVESK 364
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 133 bits (322), Expect = 4e-30
Identities = 82/235 (34%), Positives = 123/235 (52%), Gaps = 2/235 (0%)
Frame = -1
Query: 745 RKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLE 566
RK++E D + + VRV+ HT KL +KK I+EI++ G IE+++ +A+E L
Sbjct: 123 RKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIGGKDIEERLNYAKEILG 181
Query: 565 KPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTK-KLPRKTHKGL-RKVACIGAWHPS 392
K + + VF + E++D I RW K + + KG+ R V IG W P
Sbjct: 182 KQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPK 241
Query: 391 RVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGF 212
V ++V GQ GYH RTE NK+I +IG NN ITP GGF
Sbjct: 242 MVMWSVPMPGQMGYHQRTEYNKRILKIG------------NNGD--------EITPKGGF 281
Query: 211 PHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
HYG + N++V++KG GP KR+I LR+++R + ++ + +I T+SK G
Sbjct: 282 LHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIR--PQEPLIKVPEITYISTTSKQG 334
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 114 bits (274), Expect = 3e-24
Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
Frame = -1
Query: 694 VRVIAHTQMKLLKQRQKKAH-IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMID 518
VR+I TQ L+K K IME+ L GG K++WA E L I +D V+ + +D
Sbjct: 163 VRLIVATQPALVKSVPSKTPVIMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELD 222
Query: 517 CIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRT 338
+ R+ K L K K R++ +G + V T+ +AGQ GYH RT
Sbjct: 223 VVGITKGKGWQGVIKRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRT 282
Query: 337 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 158
E+NK+I RI + E +TP GGF HYGEV N +++++G
Sbjct: 283 ELNKRILRIS-------------------NPGESDVTPAGGFLHYGEVTNPYMVLEGSLP 323
Query: 157 GPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
GP KR++ R +R HT + ++L ++ TSSK G
Sbjct: 324 GPAKRLLRFRDPVRPHTN---VFDVDLTYVSTSSKQG 357
>UniRef50_Q99N25 Cluster: Ribosomal protein L3; n=2; Theria|Rep:
Ribosomal protein L3 - Mus musculus (Mouse)
Length = 67
Score = 113 bits (273), Expect = 4e-24
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = -1
Query: 286 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 107
GK+IKNNAST+YDLS+KSI P+GGF HYGEV NDF+M+KGC +G KKR++TLRKSL V T
Sbjct: 1 GKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQT 60
Query: 106 KRAALEK 86
KR ALEK
Sbjct: 61 KRRALEK 67
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 109 bits (262), Expect = 8e-23
Identities = 69/195 (35%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Frame = -1
Query: 694 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 515
+RVI TQ K +KK +ME ++ G + ++ ++A E L + I VF + E++D
Sbjct: 145 IRVIVATQPKKAGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDV 204
Query: 514 IXXXXXXXXXXXTSRWHTKKLPRKTHKGL--RKVACIGAWHPSRVSFTVARAGQKGYHHR 341
RW RKT + R + IG PSRV +TV AGQ GYH R
Sbjct: 205 SAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQR 264
Query: 340 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 161
TE NK+I +IG+ DG + +TP GGF +YG V D++MI G
Sbjct: 265 TEHNKRILKIGE-----DG---------------EEVTPRGGFVNYGVVRGDYIMIHGTV 304
Query: 160 MGPKKRIITLRKSLR 116
GPKKR+I +R ++R
Sbjct: 305 PGPKKRLIRVRPAVR 319
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 105 bits (253), Expect = 1e-21
Identities = 73/217 (33%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Frame = -1
Query: 694 VRVIAHTQM-KLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMID 518
VR+I +Q K+ K IME+ L GG + ++ WA E L + + ++ VF ID
Sbjct: 143 VRLIVSSQPDKVSAVGSKSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDID 202
Query: 517 CIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRT 338
I R+ K L K K R++ +G + V T+ +AGQ GYH RT
Sbjct: 203 VIGVTKGYGNQGVVRRFGVKLLSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRT 262
Query: 337 EMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCM 158
E NK+I RI A E E ITP GGF HYGEV N +++I+G
Sbjct: 263 EYNKRILRI---------------AGEE----ESQITPAGGFLHYGEVKNHYMIIQGSLP 303
Query: 157 GPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
GP KR+I R + R R +++ ++ T+SK G
Sbjct: 304 GPAKRLIRFRDAAR---PRREQPPVDITYVSTASKQG 337
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 101 bits (243), Expect = 2e-20
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Frame = -1
Query: 649 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 470
+K +ME ++ GG + + ++A+ + K + + VFA E++D R
Sbjct: 157 KKVPELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVR 216
Query: 469 WHTKKLPRKTHKGLRK--VACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 296
W RK + +K V +G W+P R+ + V + GQ GYH RTE NK+I ++G
Sbjct: 217 WGIATQKRKHARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMG---- 272
Query: 295 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 116
D +E+ ITP GGF HYG + ND++M+KG GP KR++ +R ++R
Sbjct: 273 ---------------DKAEE-ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAVR 316
Query: 115 VHTKRAALEKINLKFIDTSSKFG 47
K + + ++ T SK G
Sbjct: 317 --PKNMPKQAPEITYLSTQSKMG 337
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 100 bits (240), Expect = 4e-20
Identities = 66/206 (32%), Positives = 99/206 (48%)
Frame = -1
Query: 733 EKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIP 554
EK KK+ ++V I+ + L QKK +I E ++GG I + +E L K I
Sbjct: 131 EKSLKKIKEIFAIV-AISPSAAGL---EQKKPYIFEASVSGGDIPKQFAHVKELLGKEIK 186
Query: 553 VDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTV 374
+D +F +D RW+ KK K+ K +R+V +G P V +TV
Sbjct: 187 IDQIFETGASVDVAAITKGKGWQGVLKRWNVKKKQHKSRKTVREVGSLGPISPQSVMYTV 246
Query: 373 ARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEV 194
RAGQ G+H R E +K+I +G +T+ D + I P GGF H+G V
Sbjct: 247 PRAGQFGFHQRVEYDKRIMIMG---------------NTDDD--KLKINPDGGFKHFGLV 289
Query: 193 NNDFVMIKGCCMGPKKRIITLRKSLR 116
DF+++KG G +R+I LR +R
Sbjct: 290 KGDFIVLKGSVPGAYRRLIKLRSQIR 315
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 100 bits (240), Expect = 4e-20
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Frame = -1
Query: 694 VRVIAHTQMKLLKQ-RQKKAHIMEIQLNGG-TIEDKVKWAREHLEKPIPVDSVFAQDEMI 521
VR+I T+ K + KK I E+++ GG +++++ ++A HL K I + + +
Sbjct: 133 VRLIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHLGKTIRFEDFSKPGKFV 192
Query: 520 DCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHR 341
D + R+ K LPRK K R + +G WHP V TV +AGQ GY R
Sbjct: 193 DVLSVTKGKGFTGHVQRFGVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQR 252
Query: 340 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 161
T N ++ + +G +A T I GGF HYG V ND+V++ G
Sbjct: 253 TISNVRVLKYSKG----------EDADT--------INVRGGFLHYGLVKNDYVLLFGSV 294
Query: 160 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
GP KR+I +R R K ++ + L +I SK G
Sbjct: 295 PGPAKRLIKMRDPAR--QKVPDIDNVKLDYISLESKQG 330
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 100 bits (240), Expect = 4e-20
Identities = 64/214 (29%), Positives = 106/214 (49%)
Frame = -1
Query: 694 VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 515
V++I TQ +K + K I +I + G + K+++A L K + ++ VF + + +D
Sbjct: 133 VKIIVSTQPWKIKLK-KTPEIFDIPIGGSDVNKKLEYALSLLGKELSINDVFKEGQYVDV 191
Query: 514 IXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTE 335
I R+H + K+ KG+RKV IG+ P R+ TV GQ GYH RTE
Sbjct: 192 IAVTKGKGFQGVIKRFHVHRRQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTE 251
Query: 334 MNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 155
NK I +IG+ ++ + GG+ YG+V +++KG G
Sbjct: 252 YNKLIIKIGEPLNVE-----------------------GGWVRYGQVIGPTILLKGSVPG 288
Query: 154 PKKRIITLRKSLRVHTKRAALEKINLKFIDTSSK 53
P+KR+I LR+++R K+ +E +++I S K
Sbjct: 289 PRKRLIILREAIRPPRKQEKVE--GIEYISLSPK 320
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 97.5 bits (232), Expect = 4e-19
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Frame = -1
Query: 766 EWQDELGRKSIEKDFKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTI 602
E E G K +E ++K+ + +RVIA T L +KK I+EI++ GGT+
Sbjct: 171 EPHSEYGFKFLENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTL 230
Query: 601 EDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR--KTHKGL 428
+++ +A + L + VD VF + + ID I R+ K+LPR K KG
Sbjct: 231 SERIDYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGS 290
Query: 427 RKVACIGAWHPSRVSFT-VARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 251
RK IG+ P + + + GQ G+H RTE NK+I +IG
Sbjct: 291 RK---IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIG------------------- 328
Query: 250 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 116
++ +TP GGF YG V ++M+ G +GP+KR++ LR +R
Sbjct: 329 -INGWEVTPKGGFLGYGIVYGPYIMLHGSIIGPRKRLLVLRHPIR 372
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 95.9 bits (228), Expect = 1e-18
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Frame = -1
Query: 700 SVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMI 521
S VRV+A TQ +L +KK ++EI + GG E + A E L K + + VF + + I
Sbjct: 136 SEVRVLAATQPRLSGLGKKKPELIEIAV-GGPPEKALSLALEKLGKDLTISDVFKEGDYI 194
Query: 520 DCIXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 347
D I R+ +++PR K KG ++ +G P+ + F GQ G+H
Sbjct: 195 DVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGPQKPA-IMFYTPFPGQLGFH 253
Query: 346 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 167
RTE NK+I ++G D + S K I P GG+PHYG V + F++++G
Sbjct: 254 QRTEYNKRILKVG------DAE------------SLKEINPPGGWPHYGLVRSQFIIVEG 295
Query: 166 CCMGPKKRIITLRKSLR 116
G KR++ LR ++R
Sbjct: 296 SVPGAVKRLVRLRHAIR 312
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 93.5 bits (222), Expect = 6e-18
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Frame = -1
Query: 694 VRVIAHTQM-KLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKP--IPVDSVFAQDEM 524
+RVI HT +K +ME ++ GGT+ D++++A + +E VF E
Sbjct: 138 IRVITHTVPGDTAGVPKKNPDVMETRVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEF 197
Query: 523 IDCIXXXXXXXXXXXTSRWHTKKLPRK-THKGLRK-VACIGAWHPSRVSFTVARAGQKGY 350
D RW +K K +G R+ + +G W+PSRV TV + GQ GY
Sbjct: 198 TDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGY 257
Query: 349 HHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIK 170
H RTE+NK++ I G TP GGFP+YGEV+ + ++K
Sbjct: 258 HQRTELNKRLIDINDG---------------------DEPTPDGGFPNYGEVDGPYTLVK 296
Query: 169 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
G GP++R++ R ++R + + L+ ++++ T+S G
Sbjct: 297 GSVPGPEQRLVRFRPAVRPN-ESPRLDP-EVRYVSTASNQG 335
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 88.6 bits (210), Expect = 2e-16
Identities = 51/189 (26%), Positives = 88/189 (46%)
Frame = -1
Query: 649 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 470
QK+ +I E + GG+++++ + ++ L K + V +D R
Sbjct: 153 QKRPYIFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQR 212
Query: 469 WHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKK 290
K+ K+ K +R++ +G P V +TV RAGQ G+H R E NK+I +G
Sbjct: 213 MGAKRKQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSA---- 268
Query: 289 DGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVH 110
G+ + +I P GG+ H+G V D++++KG G +R++ LR +R
Sbjct: 269 -GE-------------DDAINPSGGYKHFGMVKGDYIVLKGSVPGTYRRLVKLRAQIRNA 314
Query: 109 TKRAALEKI 83
KR + I
Sbjct: 315 PKRTSKPNI 323
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 87.0 bits (206), Expect = 5e-16
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Frame = -1
Query: 691 RVIAHTQMKLLKQRQKKA-HIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDC 515
R++ TQ + + KKA ++EIQ+ GG + ++ +A L K I + VF + ++ID
Sbjct: 158 RLLVSTQPRKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDV 217
Query: 514 IXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHR 341
+ R+ +LPR K KG RK+ G S+T + GQ G+H R
Sbjct: 218 VGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRR 275
Query: 340 TEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCC 161
TE NK+I +IG K I P GGF YG V N +V+++G
Sbjct: 276 TEYNKRIIKIGD--------------------EPKEINPAGGFVRYGIVRNTYVLLEGSI 315
Query: 160 MGPKKRIITLRKSLR 116
+G KKR I LR+ +R
Sbjct: 316 LGSKKRPIFLREPVR 330
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 85.4 bits (202), Expect = 2e-15
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Frame = -1
Query: 730 KDFKKMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQLNGGTIEDKV-KWAREHLEKPI 557
K ++ + VR+IA +Q KL +KK ++EI++ G + K+ +A++ L I
Sbjct: 132 KSLEERLDKAEDVRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLI 191
Query: 556 PVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR--KTHKGLRKVACIGAWHPSRVS 383
V+ VF + +++D I RW K+LPR K KG R+ IGA R +
Sbjct: 192 AVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRR---IGARSHGRST 248
Query: 382 F-TVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPH 206
F +AGQ G+H RTE NK+I I +K +TP GGF
Sbjct: 249 FWETPQAGQTGFHRRTEYNKRILMIDDDGYK--------------------VTPAGGFLR 288
Query: 205 YGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT--KRAALEKINLKFIDTSSKFG 47
YG V + FVM+ G G KR I +R ++R + + K + +I +SK G
Sbjct: 289 YGVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQG 343
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 80.2 bits (189), Expect = 6e-14
Identities = 42/121 (34%), Positives = 62/121 (51%)
Frame = +2
Query: 344 VMITFLTSTSYSERHPRRMPSSNAGNFPKXXXXXXXXXXXXPTRSDTFVSFALGDTNAVN 523
+++T LTS+ + MPS+N N + P+ DT + GD+N +N
Sbjct: 1 MVVTVLTSSGNGPVNVSWMPSTNTSNLSQTSVGLSWQFLGTPSVGDTLETVTFGDSNDIN 60
Query: 524 HFILGKHRIDRDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXXVGNDSYNTT 703
HFIL ++R++R+ F ++F GP +FV DGTTV LDF V V DS N +
Sbjct: 61 HFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQDSDNRS 120
Query: 704 V 706
V
Sbjct: 121 V 121
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 67.3 bits (157), Expect = 4e-10
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Frame = -1
Query: 649 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSR 470
+K I+E+++ G +E +++A+ L + + V+ V + +D I R
Sbjct: 179 KKAPDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKR 237
Query: 469 WHTKKLPR--KTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIH 296
+ K+LP+ K KG R+V +W S+ V + GQ GYH RT+ NK++ I
Sbjct: 238 FGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVLMISDDPS 295
Query: 295 KKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLR 116
K I GG+ HYG V + +V++KG GP KR I +R +R
Sbjct: 296 K--------------------INVEGGWLHYGLVKSKYVVLKGSVFGPPKRPIIMRLPVR 335
>UniRef50_UPI0000D9B08A Cluster: PREDICTED: similar to 60S ribosomal
protein L3 (L4); n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L3 (L4) - Macaca
mulatta
Length = 153
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -1
Query: 160 MGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQT 29
+G KK+++TL KS V TK ALEKI+LKFIDT+SKFGHGRFQT
Sbjct: 88 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQT 131
>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 253
Score = 36.7 bits (81), Expect = 0.70
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = -1
Query: 751 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 572
L RKSIE + + IR+ +V I +K++++++ + E +L GT + + A
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194
Query: 571 LEKPIPVDSVFAQDEMI 521
EKPI ++ + ++ I
Sbjct: 195 KEKPISLEEILDPEDRI 211
>UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2;
Clostridiaceae|Rep: Purine catabolism PurC-like -
Clostridium oremlandii OhILAs
Length = 551
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = -1
Query: 700 SVVRVIAHTQMKLLKQRQKKAH--IMEIQLNGGTIEDKVKWAREHLEKPI 557
SV + I + Q LL QR +K H +M + L GG+IED + RE+L P+
Sbjct: 126 SVFKEIFNKQTSLL-QRLEKVHEQLMNVVLEGGSIEDIGRVTRENLRNPL 174
>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1482
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +2
Query: 131 KSNDTLFRSHAATLDHHKVVVYFTIMGETSHWCNGFLRQVILSRCIVFNNFAILFVDSLS 310
+ N+ + TL H ++ YF + +SH ++I + +++NNFA +F+ L
Sbjct: 450 QKNNIKYNIKWLTLFFHSLIQYFVYLNNSSHILINHKDKIIFIKHLLYNNFAQMFLKYL- 508
Query: 311 NTIDFLVHFSTVMITFLTST 370
D V+F+ + I + S+
Sbjct: 509 --CDNYVYFTPINILSIYSS 526
>UniRef50_Q0TYH2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 685
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -1
Query: 319 YRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 140
YR G H DG + NNA++++ +K +P F GE + ++ G + K
Sbjct: 567 YRSSWGYHGDDGAIFLNNANSDFSYYKKE-SPSDDFGAKGEFGANDIVGVGLNLETGKGF 625
Query: 139 ITLRKSLR 116
+TL +LR
Sbjct: 626 VTLNGNLR 633
>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 135
Score = 33.9 bits (74), Expect = 4.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 763 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 608
WQD K I+KD+ + YC +R+ H +L ++ K HI+ + G
Sbjct: 29 WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79
>UniRef50_A6BE46 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 152
Score = 33.5 bits (73), Expect = 6.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 188 VVYFTIMGETSHWCNGFLRQVILSRCIVF 274
+++FT GE HW + FLRQV+ RC +F
Sbjct: 41 MMFFTYQGELVHWQDDFLRQVL--RCSIF 67
>UniRef50_A2TY72 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 587
Score = 33.5 bits (73), Expect = 6.5
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = -1
Query: 361 QKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDF 182
++ H E++K +G+GI+ + + N S YD S GF + N F
Sbjct: 140 EQNIHLVAEISKSRPYVGEGIYVEYRLYVSENVSV-YDTSVTEAPQYNGFWNQEIKINGF 198
Query: 181 VMIKGCCMGPKKRIITLRKSLRVHTKRAAL 92
+ G G R I L+K+L + TK L
Sbjct: 199 PVKMGKYNGENYRYIVLQKALLIPTKTGRL 228
>UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4;
Arabidopsis thaliana|Rep: Putative F-box protein
At1g33020 - Arabidopsis thaliana (Mouse-ear cress)
Length = 518
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 546 ESTGIGFSRCSLAHFTLSSMVPPLSWISIM*AFFCRCFNSFI 671
E TG+ S+C +H +S + PL W+SI+ F + SF+
Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514
>UniRef50_Q6KI55 Cluster: 50S ribosomal protein L3; n=11;
Bacteria|Rep: 50S ribosomal protein L3 - Mycoplasma
mobile
Length = 297
Score = 33.1 bits (72), Expect = 8.6
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -1
Query: 199 EVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLK 74
++ N+ +++KG GPK + ++ +++ R A+E +N+K
Sbjct: 181 DIKNNILLVKGSVPGPKNCFLIIKSAIKNLPSREAIELVNIK 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,435,343
Number of Sequences: 1657284
Number of extensions: 17278704
Number of successful extensions: 40391
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 38987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40364
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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