Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C17
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...   447   e-126
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...   447   e-126
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...   447   e-126
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...   447   e-126
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...   447   e-126

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score =  447 bits (1102), Expect = e-126
 Identities = 203/248 (81%), Positives = 223/248 (89%)
 Frame = -1

Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 587
           +W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVK
Sbjct: 147 KWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 206

Query: 586 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIG 407
           WAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIG
Sbjct: 207 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 266

Query: 406 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 227
           AWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSIT
Sbjct: 267 AWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSIT 326

Query: 226 PMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
           PMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK G
Sbjct: 327 PMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMG 386

Query: 46  HGRFQTPA 23
           HGRFQTPA
Sbjct: 387 HGRFQTPA 394


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score =  447 bits (1102), Expect = e-126
 Identities = 203/248 (81%), Positives = 223/248 (89%)
 Frame = -1

Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 587
           +W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVK
Sbjct: 136 KWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 195

Query: 586 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIG 407
           WAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIG
Sbjct: 196 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255

Query: 406 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 227
           AWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSIT
Sbjct: 256 AWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSIT 315

Query: 226 PMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
           PMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK G
Sbjct: 316 PMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMG 375

Query: 46  HGRFQTPA 23
           HGRFQTPA
Sbjct: 376 HGRFQTPA 383


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score =  447 bits (1102), Expect = e-126
 Identities = 203/248 (81%), Positives = 223/248 (89%)
 Frame = -1

Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 587
           +W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVK
Sbjct: 123 KWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 182

Query: 586 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIG 407
           WAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIG
Sbjct: 183 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 242

Query: 406 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 227
           AWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSIT
Sbjct: 243 AWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSIT 302

Query: 226 PMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
           PMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK G
Sbjct: 303 PMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMG 362

Query: 46  HGRFQTPA 23
           HGRFQTPA
Sbjct: 363 HGRFQTPA 370


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score =  447 bits (1102), Expect = e-126
 Identities = 203/248 (81%), Positives = 223/248 (89%)
 Frame = -1

Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 587
           +W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVK
Sbjct: 123 KWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 182

Query: 586 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIG 407
           WAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIG
Sbjct: 183 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 242

Query: 406 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 227
           AWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSIT
Sbjct: 243 AWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSIT 302

Query: 226 PMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
           PMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK G
Sbjct: 303 PMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMG 362

Query: 46  HGRFQTPA 23
           HGRFQTPA
Sbjct: 363 HGRFQTPA 370


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score =  447 bits (1102), Expect = e-126
 Identities = 203/248 (81%), Positives = 223/248 (89%)
 Frame = -1

Query: 766 EWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 587
           +W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDKVK
Sbjct: 136 KWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 195

Query: 586 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIG 407
           WAREHLEKPI V +VF QDEMIDC+           TSRWHTKKLPRKTHKGLRKVACIG
Sbjct: 196 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIG 255

Query: 406 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 227
           AWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSIT
Sbjct: 256 AWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSIT 315

Query: 226 PMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFG 47
           PMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL  HTKR+ALE+I LKFIDTSSK G
Sbjct: 316 PMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMG 375

Query: 46  HGRFQTPA 23
           HGRFQTPA
Sbjct: 376 HGRFQTPA 383


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,117,098
Number of Sequences: 53049
Number of extensions: 819512
Number of successful extensions: 1949
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1949
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)