Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C14
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 583 IALYLNKNNSQAVNVKRIKVTKNLIVGLNH 672
           +++ L+KNN Q +++ + K T      LNH
Sbjct: 298 LSMKLSKNNDQCLDLSKTKETNLEKSNLNH 327


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 583 IALYLNKNNSQAVNVKRIKVTKNLIVGLNH 672
           +++ L+KNN Q +++ + K T      LNH
Sbjct: 190 LSMKLSKNNDQCLDLSKTKETNLEKSNLNH 219


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 649 NLIVGLNHFTLISLNSTGIDIQTYHTSIYKDG 744
           +++V +  FTL+S+  T + I+   +   KDG
Sbjct: 167 DVVVPITQFTLLSIGETAMGIKLNASDNDKDG 198


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 649 NLIVGLNHFTLISLNSTGIDIQTYHTSIYKDG 744
           +++V +  FTL+S+  T + I+   +   KDG
Sbjct: 167 DVVVPITQFTLLSIGETAMGIKLNASDNDKDG 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,980
Number of Sequences: 336
Number of extensions: 2940
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)