Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C12
         (474 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74035-3|CAA98481.1|  808|Caenorhabditis elegans Hypothetical pr...    29   2.3  
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    29   2.3  
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p...    27   5.2  
U64853-5|AAB04978.2|  460|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AC084154-4|AAK29868.1|  767|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z74035-3|CAA98481.1|  808|Caenorhabditis elegans Hypothetical
           protein F47G9.4 protein.
          Length = 808

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 21/92 (22%), Positives = 40/92 (43%)
 Frame = -3

Query: 307 EVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLI 128
           ++L+ ++ L PY+ CIL+ +    D K         +E+ C + T  +     R++    
Sbjct: 464 QILTAAKQLVPYVSCILNMNAMI-DPKRCHPPDPAPMESICLEITGIEPNSQNRILAIEK 522

Query: 127 NNESKSWNELTAKYDPEXKFTAKDEKELRESK 32
             E++  N+  AK   E    +   K L+  K
Sbjct: 523 EEENRRLNQ-EAKKKEELAGQSAVMKTLKHGK 553


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 15/73 (20%), Positives = 35/73 (47%)
 Frame = -3

Query: 268  KCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAK 89
            KC  +  +CA + +++ +   + ++  C KC +  KK  + V   +    +K+  ++  K
Sbjct: 1273 KCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNV-QKMCKKCAKNVQKMCKK 1331

Query: 88   YDPEXKFTAKDEK 50
            Y  E    + D++
Sbjct: 1332 YGLEVPVYSNDDE 1344


>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
           protein R05D3.11 protein.
          Length = 1327

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 26/108 (24%), Positives = 46/108 (42%)
 Frame = -3

Query: 346 DKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEA 167
           D   D YD   + E+L N +  +       D+D       +L E I  A  ++     +A
Sbjct: 35  DLTVDDYDETEIQEILDNGKAEEG-----TDED------SDLVEGILNA-NSDVQALLDA 82

Query: 166 QKKGTRRVIGHLINNESKSWNELTAKYDPEXKFTAKDEKELRESKAEE 23
             +   + +     NES+    + A+   + + TAKDE EL++ +  E
Sbjct: 83  PSEQVAQALNSFFGNESEQ-EAVAAQRRVDAEKTAKDEAELKQQEEAE 129


>U64853-5|AAB04978.2|  460|Caenorhabditis elegans Hypothetical
           protein K11G9.5 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = -3

Query: 85  DPEXKFTAKDEKELRESKAEEH 20
           DPE K +A + +++R++K+E+H
Sbjct: 208 DPEKKVSADELRKIRKNKSEQH 229


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -3

Query: 211 IREALETECAKCTEAQKKGTRRVIGHLINNESK--SWNELTAKYDPEXKFT 65
           +++A++ E AKC    +   R VIG  + +E K  +W      ++ E  FT
Sbjct: 533 LKDAVDAEMAKCPITCQAIIRNVIGLGVEDEDKRTTWLADAENFEKEEAFT 583


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 352 VWREPRPKRQTGRM 393
           +W EP+PK+Q+G M
Sbjct: 487 IWLEPKPKKQSGAM 500


>Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical
           protein T02E1.3a protein.
          Length = 646

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 352 VWREPRPKRQTGRM 393
           +W EP+PK+Q+G M
Sbjct: 454 IWLEPKPKKQSGAM 467


>AC084154-4|AAK29868.1|  767|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.7 protein.
          Length = 767

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 166 QKKGTRRVIGHLINNESKSWNELTAKYDPE 77
           Q++ T  V+   +N E  +WN +  KY PE
Sbjct: 544 QERVTHIVMLGQVNEEDANWNRMFCKYFPE 573


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,604,667
Number of Sequences: 27780
Number of extensions: 184402
Number of successful extensions: 575
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)