Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C11
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 31 0.63
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 31 0.63
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 30 1.5
07_01_0054 - 417945-418157 30 1.9
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 2.5
12_01_0607 - 5001490-5001552,5001584-5001895,5002002-5002004 29 3.3
10_01_0260 - 2726204-2727370 29 4.4
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 28 5.9
07_03_0142 - 14251959-14252230,14252244-14252316 28 5.9
06_03_1189 + 28271185-28271394,28272421-28273326 28 5.9
06_03_0203 - 17863130-17863940,17864023-17864341,17864653-178647... 28 5.9
05_03_0669 + 16802158-16802495,16802574-16803906,16803970-16804818 28 5.9
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 28 5.9
09_06_0352 + 22472369-22472731,22472829-22472941,22473420-224742... 28 7.7
08_02_1492 + 27504158-27506098 28 7.7
05_01_0557 - 4879244-4879666 28 7.7
03_02_0314 + 7398247-7400877 28 7.7
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 28 7.7
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 436 LYWLARYLMRKAALVLAEGSSCAS--AAPNAPHPPRDTSERH 555
+ W R ++ AA VLA GSS S AAP P PP S RH
Sbjct: 449 ILWHRRDIILSAA-VLAAGSSTPSSAAAPAPPSPPEPPSPRH 489
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 436 LYWLARYLMRKAALVLAEGSSCAS--AAPNAPHPPRDTSERH 555
+ W R ++ AA VLA GSS S AAP P PP S RH
Sbjct: 495 ILWHRRDIILSAA-VLAAGSSTPSSAAAPAPPSPPEPPSPRH 535
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 505 SAAPNAPHPPRDTSERHAGEYSRQPHDKAYRHLTSASPCSDCTKVSXTFS 654
+AA APHPP+ E A Y R+ +D Y + +SA P + + S + S
Sbjct: 94 AAAGAAPHPPQQQREDPA-FYGRRRYDDEYSNNSSARPRRNSSNSSSSSS 142
>07_01_0054 - 417945-418157
Length = 70
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 421 CSLASLYWLARYLMRKAALVLAEGSSCASAAPNAPHP 531
CS+ S W R L K AEG S PN P P
Sbjct: 9 CSVKSKTWNERKLCTKRGTCRAEGFDYGSCYPNRPRP 45
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 8 FRSXVHSLSSAVGGPTKFGGNTESTAQD*FGTLSL 112
FRS S SS GP GNT + + FG LSL
Sbjct: 260 FRSNNSSFSSRASGPNVLQGNTPKSFGNGFGQLSL 294
>12_01_0607 - 5001490-5001552,5001584-5001895,5002002-5002004
Length = 125
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 232 SWKVLRKKRSIVKRSSGRCLSGISQWRSWLKKPIDKCE 119
SW+ +R+ S ++ CL G+ W+K P +C+
Sbjct: 73 SWRFIRRCSSALESELLACLEGLKLAVEWIKMPWRECQ 110
>10_01_0260 - 2726204-2727370
Length = 388
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 161 AYARQTPS*GSLHNTPFLP*NFPAQGVLSAVLKSPSSV 274
A+ R P G HN+P LP PA+GV V +S+
Sbjct: 61 AFHRTPPVLGFFHNSPDLPRFVPAEGVPGRVAAEAASL 98
>10_08_0584 +
18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +1
Query: 430 ASLYWLARYLMRKAALVLAEGSSCASAAPNAPHPPRDTSERHAGEYSRQPHDKAYRHLTS 609
A L+ LA + RK S AAP AP P + R R H H+ +
Sbjct: 46 AELFQLADRVARKEEAWTWNSSGSGVAAPAAPGPAARSGRRDRRRKKRSAHSDDEGHVLA 105
Query: 610 ASPCSDCTK 636
S T+
Sbjct: 106 VEGASRATR 114
>07_03_0142 - 14251959-14252230,14252244-14252316
Length = 114
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 238 TLSW-KVLRKKRSIVKRSSGRCLSGISQWR 152
+L W ++ ++R + +R SGRC G+ WR
Sbjct: 6 SLRWMRMAGRRRWLKRRRSGRCRRGLRSWR 35
>06_03_1189 + 28271185-28271394,28272421-28273326
Length = 371
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 292 WSRTLGSRSSSRVQSKFRRCSLVASRPPLSCSAIVLTTLCWMNCSLASLYWLARYLMRKA 471
++R G+ S + RR L R +S +A + ++L W SLA L + Y R+
Sbjct: 162 YTRYSGTWSGRKGVEVSRRTKLNRLRFVVSPAAGMASSLAWAGSSLAPLIY--PYFFRRE 219
Query: 472 ALVLAEGSSCASAAPNAPHPPRDT 543
L L SS AAP + PP T
Sbjct: 220 LLEL--WSSLIMAAPASIVPPGAT 241
>06_03_0203 -
17863130-17863940,17864023-17864341,17864653-17864716,
17864811-17864929,17865515-17865640,17866626-17866632,
17867421-17867562,17867720-17867738,17868082-17868292
Length = 605
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 71 CSHQI*WAHRQQKRESELANEKA 3
CS WAH++++R EL EKA
Sbjct: 49 CSSLADWAHQRKRRREELRREKA 71
>05_03_0669 + 16802158-16802495,16802574-16803906,16803970-16804818
Length = 839
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +1
Query: 430 ASLYWLARYLMRKAALVLAEGSSCASAAPNAPHPPRDTSERHAGEYSRQPHDKAYRHLTS 609
A L+ LA + RK S AAP AP P + R R H H+ +
Sbjct: 151 AELFQLADRVARKEEAWTWNSSGSGVAAPAAPGPTARSGRRDRRRKKRSAHSDDEGHVLA 210
Query: 610 ASPCSDCTK 636
S T+
Sbjct: 211 VEGASRATR 219
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Frame = +1
Query: 436 LYWLARYLMRKAALVLAEGSSCAS-------AAPNAPHPPRDTSERH 555
+ W R ++ AA VLA GSS S AAP P PP+ S RH
Sbjct: 536 ILWHRRDIILSAA-VLAAGSSTPSSSQAMTAAAPAPPSPPKPPSPRH 581
>09_06_0352 +
22472369-22472731,22472829-22472941,22473420-22474226,
22474314-22474620,22474862-22475027,22475491-22475534,
22476019-22476161,22477900-22477937,22478032-22478129,
22478130-22478220,22478514-22478693,22479311-22479495,
22479583-22479678,22480151-22480297,22480763-22480864,
22480932-22481564
Length = 1170
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 511 APNAPHPPRDTSERHAGEYSRQPHDKAYR 597
AP AP P + E+H E ++ HD R
Sbjct: 466 APPAPDSPEQSQEQHRDEEEQELHDNVVR 494
>08_02_1492 + 27504158-27506098
Length = 646
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -1
Query: 590 ALSCGCREYSPACRSLVSRXXXXXXXXXXAQDEP-SARTKAAFLIRYLASQYSDAKEQFI 414
AL+ G P C L+ +D P + A+ + LA+ + ++ F+
Sbjct: 208 ALAIGLLGRDPECVELMVLAGVCTAFAKILKDAPMKVQGMVAWAVSELATNHPKCQDAFL 267
Query: 413 QHNVVRTIAEQL 378
Q NV+R + L
Sbjct: 268 QSNVIRLLVSHL 279
>05_01_0557 - 4879244-4879666
Length = 140
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 451 RYLMRKAALVLAEGSSCASAAPNAPHPP 534
R L+R AA +L SS A+AAP PP
Sbjct: 6 RLLLRAAASLLRPSSSSAAAAPTPALPP 33
>03_02_0314 + 7398247-7400877
Length = 876
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 125 LIYRLLQPRSPLAYARQTPS*GSLHNTPFLP*NFPAQGVLSAVLKSPSS 271
L+ ++ S L +A P G+L P P FPA L AVL++PSS
Sbjct: 66 LLRHFVRSTSFLPFADLDPLSGALLTAPSPP--FPAPSNLLAVLRAPSS 112
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 466 KAALVLAEGSSCASAAPNAPHPPRDTSERHAGEYSRQP 579
+ A V+A A+ PN P+ + E AG+ SR+P
Sbjct: 34 EGAAVVAVAPEAAAEGPNEPNAGEASREPDAGQASREP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,592,363
Number of Sequences: 37544
Number of extensions: 331037
Number of successful extensions: 1278
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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