Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C11
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    29   0.10 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.2  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    23   6.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.7  

>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 29.5 bits (63), Expect = 0.10
 Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
 Frame = -1

Query: 311 DPRVLDQCRDPTLHLKETLEQHLGHPELESFTEEKEYCEEILRKVFVGHKPVEIVVEEAD 132
           +P V ++ R+    +K+TL+++ G    E+ +E   Y E+ + +    H PV I+   AD
Sbjct: 326 NPEVQERAREC---VKQTLQKYDGKLSYEAVSE-MSYLEQCISETLRKHPPVAILERNAD 381

Query: 131 R*VR----GVLMKVSRINLVP 81
           +  R    G+L++  +  ++P
Sbjct: 382 KDYRLPDSGLLLRRGQKIMIP 402


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 238 CPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQS 336
           CP  CS +SF   +    ++ TL + S SRV S
Sbjct: 740 CPDKCSVISFSHSLSPISFNYTLSNSSLSRVLS 772


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 121 RTYLSASSTTISTGLCPTNTFLRISSQYSFSSVK 222
           R + +A      TG+ P N F  +S  +S  ++K
Sbjct: 55  RIHQNARECVKETGILPKNAFRVLSGDFSVDTMK 88


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = +1

Query: 187 RISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSRHWSRTLGSRSSSRVQSKFRR 348
           R S   S S  K S S        VS     GSR  SRT  SRS S+ ++   R
Sbjct: 404 RSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSR 457


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,947
Number of Sequences: 2352
Number of extensions: 11895
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)