Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C11
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    31   0.98 
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    31   0.98 
Z98866-14|CAB11553.1|  524|Caenorhabditis elegans Hypothetical p...    29   2.3  
AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin...    29   3.9  
AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical ...    28   6.9  
AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical...    28   6.9  

>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
            protein ZK1251.9 protein.
          Length = 1701

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 105  FH*DPSHLSIGFFNHDLHWLMPDKHLPE 188
            F  D  HL +G FN ++HW+  D  L E
Sbjct: 1096 FSVDDEHLIVGLFNGEVHWINVDTGLDE 1123


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
            ZK1251.9 protein.
          Length = 1701

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 105  FH*DPSHLSIGFFNHDLHWLMPDKHLPE 188
            F  D  HL +G FN ++HW+  D  L E
Sbjct: 1096 FSVDDEHLIVGLFNGEVHWINVDTGLDE 1123


>Z98866-14|CAB11553.1|  524|Caenorhabditis elegans Hypothetical
           protein Y49E10.17 protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 28/93 (30%), Positives = 41/93 (44%)
 Frame = +1

Query: 109 IKTPRTYLSASSTTISTGLCPTNTFLRISSQYSFSSVKLSSSGCPKCCSKVSFKCRVGSR 288
           +++ ++  ++SST   T L  +N     SS    S+    SSG     S  S +   GS 
Sbjct: 74  LRSEQSSKTSSSTVSCTSLGSSNIS---SSSRQPSNGSFRSSGSSNGSSSSSRRSSNGSS 130

Query: 289 HWSRTLGSRSSSRVQSKFRRCSLVASRPPLSCS 387
             S +    SSS + S  RR S  +SR   S S
Sbjct: 131 SSSGSTSDNSSSNISSSSRRSSNGSSRSSSSSS 163


>AF016686-7|AAB66241.2|  664|Caenorhabditis elegans C-type lectin
           protein 44 protein.
          Length = 664

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 494 EPSARTKAAFLIRYLASQYSDAKEQFIQHNVVRTIAEQLRGG 369
           EP AR     L   L S +S A+  FIQ  +  T+ ++ R G
Sbjct: 278 EPDAREFCLSLSEDLVSIHSQAENDFIQSLISNTVIDEFRTG 319


>AF068721-1|AAC19263.1|  369|Caenorhabditis elegans Hypothetical
           protein ZK1055.5 protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 287 RDPTLHLKETLEQHLGHPELESFTEE 210
           RDPT++L++ +  H+G      F EE
Sbjct: 47  RDPTIYLRQNVHTHIGDISFLEFREE 72


>AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical
           protein T02H6.2 protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -1

Query: 296 DQCRDPTLHLKETLEQHLGHPELESFTEEKEYCEEILRKVFVGHKPVE 153
           D   DPT ++KE LE+++ +   ++F E KE  E   +K     K VE
Sbjct: 499 DTKTDPTTNIKEFLERNM-YNAAKNFNEFKESIENREKKEAEARKKVE 545


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,381,807
Number of Sequences: 27780
Number of extensions: 265032
Number of successful extensions: 945
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)