BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C10
(615 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 25 0.38
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 25 0.38
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.0
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 2.7
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 22 3.6
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 22 3.6
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 22 3.6
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 22 3.6
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 22 3.6
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 6.2
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.38
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 270 MALSWQVAKMSLQPNTFSPFDILGTFLLLVMETQSRGSIGFGLR*AGRLY 419
+ SW+ A++ ++ F +LGTFL+ + Q + G L A RL+
Sbjct: 46 LRFSWKSARV-----VYALFTLLGTFLISGFQMQKIATKGLDLLEANRLF 90
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 25.4 bits (53), Expect = 0.38
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 270 MALSWQVAKMSLQPNTFSPFDILGTFLLLVMETQSRGSIGFGLR*AGRLY 419
+ SW+ A++ ++ F +LGTFL+ + Q + G L A RL+
Sbjct: 46 LRFSWKSARV-----VYALFTLLGTFLISGFQMQKIATKGLDLLEANRLF 90
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 68 FFIKNGFGSSDISLNTPYFSL*LKVRF 148
F+ K GF S I L P+F ++F
Sbjct: 402 FWTKKGFPKSKIVLGVPFFGRSFTLQF 428
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 454 Y*WEGGWSRTVRYNLPAY 401
Y + G W RTV +N P +
Sbjct: 708 YDFHGQWERTVGHNSPLF 725
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 132 YNEKYGVLSEMSLEPNPF 79
Y + G+LSE+ P PF
Sbjct: 315 YTTREGILSEVLQRPKPF 332
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 132 YNEKYGVLSEMSLEPNPF 79
Y + G+LSE+ P PF
Sbjct: 315 YTTREGILSEVLQRPKPF 332
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 132 YNEKYGVLSEMSLEPNPF 79
Y + G+LSE+ P PF
Sbjct: 315 YTTREGILSEVLQRPKPF 332
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 132 YNEKYGVLSEMSLEPNPF 79
Y + G+LSE+ P PF
Sbjct: 315 YTTREGILSEVLQRPKPF 332
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 132 YNEKYGVLSEMSLEPNPF 79
Y + G+LSE+ P PF
Sbjct: 314 YTTREGILSEVLQRPKPF 331
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.4 bits (43), Expect = 6.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 230 FFVTIFFLKF*TLNGSLMASCKNV 301
FFV + LK LNG+ A + V
Sbjct: 192 FFVRVIRLKIEDLNGAFRAGLERV 215
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,924
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -