Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C10
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0209 + 28420008-28421510                                         30   1.3  
10_07_0110 + 12977702-12977958,12978374-12978527,12978661-129787...    29   3.9  
05_04_0126 + 18252594-18256922                                         28   5.1  
12_01_0622 + 5124213-5125292,5126820-5128685                           28   6.8  
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438...    28   6.8  
03_05_0961 - 29224548-29225125,29225286-29225308,29225736-292258...    27   8.9  

>05_07_0209 + 28420008-28421510
          Length = 500

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 404 GREVVPNRAGPPALPSIAVRAWPYRQRRKKRNVNL 508
           G  VVP RA P A+   A R W   ++   R+VNL
Sbjct: 46  GMAVVPGRAPPSAVQIEAARRWKELEKMALRSVNL 80


>10_07_0110 +
           12977702-12977958,12978374-12978527,12978661-12978798,
           12978903-12979133,12979228-12979371,12979516-12979606,
           12979798-12979868,12980014-12980128,12980313-12980431,
           12980539-12980604,12980701-12980829,12980919-12981062,
           12981522-12981704
          Length = 613

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 235 CYDIFSKILNFKWLSHGKLQKCRFNQIPFHLSIY*AHFYC 354
           C DIF K+L+  WLS   +Q+   N     L+      YC
Sbjct: 117 CQDIFLKLLDNNWLSENTMQQLYCNSCQRFLADRLVEGYC 156


>05_04_0126 + 18252594-18256922
          Length = 1442

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 392 WFEIGREVVPNRAGPPALPSIAVRA 466
           W    RE  P + GP ++PSIA+ A
Sbjct: 206 WVSTSREQEPGQQGPSSIPSIAIVA 230


>12_01_0622 + 5124213-5125292,5126820-5128685
          Length = 981

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 205 PIEIADEAFFCYDIFSKILNFKWLSHG-KLQKCRFNQIPFHL 327
           P+E+  E FF   I   ++    +SHG K+ +CR + +  H+
Sbjct: 480 PVEVVGERFFNELINRSMIQSSKVSHGLKVDRCRVHGMMLHI 521


>08_01_0505 -
           4379722-4380795,4380868-4381008,4381099-4381270,
           4381944-4382047,4382127-4382259,4384477-4384653,
           4385164-4385309,4385536-4385625,4385703-4385915,
           4386090-4386182,4386743-4386937,4387018-4387110,
           4387924-4388019,4388556-4388985,4389424-4390091,
           4392074-4392271,4392690-4393407,4394036-4394181
          Length = 1628

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 263 TLNGSLMASCKNVASTKYLFTFRY-IRHIFIAGDGNTI 373
           T  G L A   N+ +   L   RY IRH F+A  GNT+
Sbjct: 739 TETGRLSARTPNLQNQPALEKDRYKIRHAFVAAPGNTL 776


>03_05_0961 -
           29224548-29225125,29225286-29225308,29225736-29225864,
           29226533-29228217
          Length = 804

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +2

Query: 395 FEIGREVVPNRAGPPALPSIAVRAWPYRQRRKKRNVNLKYIFFG 526
           F   R +  N +GP   P  A+ A P    RKK + NLKYI  G
Sbjct: 308 FYAARGLPYNVSGPAPTPQPAMPASP---GRKKGHKNLKYILIG 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,427,881
Number of Sequences: 37544
Number of extensions: 299974
Number of successful extensions: 602
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)