Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C10
         (615 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog o...    31   3.2  
BC015953-1|AAH15953.1|  760|Homo sapiens SFRS8 protein protein.        31   3.2  
BC008707-1|AAH08707.1|  760|Homo sapiens SFRS8 protein protein.        31   3.2  
AB208921-1|BAD92158.1|  636|Homo sapiens SFRS8 protein variant p...    31   3.2  

>U08377-1|AAA19604.1|  951|Homo sapiens protein ( Human homolog of
           Drosophila splicing regulator
           suppressor-of-white-apricot mRNA, complete cds. ).
          Length = 951

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 491 FYVSDGKATHAPLLMGGRVVPHG*VQPPCLSQTKTN*PAR 372
           F V +   T  PLL GGR +P   V+PP    +K+  P R
Sbjct: 711 FSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPR 750


>BC015953-1|AAH15953.1|  760|Homo sapiens SFRS8 protein protein.
          Length = 760

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 491 FYVSDGKATHAPLLMGGRVVPHG*VQPPCLSQTKTN*PAR 372
           F V +   T  PLL GGR +P   V+PP    +K+  P R
Sbjct: 711 FSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPR 750


>BC008707-1|AAH08707.1|  760|Homo sapiens SFRS8 protein protein.
          Length = 760

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 491 FYVSDGKATHAPLLMGGRVVPHG*VQPPCLSQTKTN*PAR 372
           F V +   T  PLL GGR +P   V+PP    +K+  P R
Sbjct: 711 FSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPR 750


>AB208921-1|BAD92158.1|  636|Homo sapiens SFRS8 protein variant
           protein.
          Length = 636

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 491 FYVSDGKATHAPLLMGGRVVPHG*VQPPCLSQTKTN*PAR 372
           F V +   T  PLL GGR +P   V+PP    +K+  P R
Sbjct: 595 FSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPR 634


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,168,635
Number of Sequences: 237096
Number of extensions: 1607419
Number of successful extensions: 2522
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2522
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)