Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C10
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00033-3|AAC48304.2|  351|Caenorhabditis elegans Serpentine rece...    28   6.1  
U00033-2|AAP68944.1|  351|Caenorhabditis elegans Serpentine rece...    28   6.1  

>U00033-3|AAC48304.2|  351|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 9 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 102 FRLTRHIFHCN*RCVLFGISINSSMFLIELQL 197
           F+L +  FH N +CVL G  +    F I  Q+
Sbjct: 55  FKLIKSSFHGNLKCVLIGYFVTVLAFTINFQI 86


>U00033-2|AAP68944.1|  351|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 8 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 102 FRLTRHIFHCN*RCVLFGISINSSMFLIELQL 197
           F+L +  FH N +CVL G  +    F I  Q+
Sbjct: 55  FKLIKSSFHGNLKCVLIGYFVTVLAFTINFQI 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,729,550
Number of Sequences: 27780
Number of extensions: 276894
Number of successful extensions: 593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)