Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C09
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.61 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    25   0.61 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.61 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   5.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 475 FNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAV 353
           +N T  +P+   +    S    E  Y Y GS  TPP  + V
Sbjct: 23  YNYTSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEV 63


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 475 FNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAV 353
           +N T  +P+   +    S    E  Y Y GS  TPP  + V
Sbjct: 23  YNYTSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEV 63


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 475 FNSTLQLPHTFSLSSILSGLDTERFYTYKGSLTTPPCAEAV 353
           +N T  +P+   +    S    E  Y Y GS  TPP  + V
Sbjct: 23  YNYTSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEV 63


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 80  IGYIYIYLFIEVDDVIFGLLVSNPVPFGVVEFGL 181
           + ++ +YLF+ +   I+GLL      F   + GL
Sbjct: 288 VTFLCLYLFLIITLTIYGLLSQLQAGFSTKDIGL 321


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 275 EIGKKTTEIIHLKHGNGQVVRKDH 346
           +I    T +IH  H NG +V K+H
Sbjct: 190 KISNLNTSLIHSTHLNGDIV-KEH 212


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 307 MDNFRGLLSNLNLPLVDNFRQ 245
           MD+FRG   +   PL++  RQ
Sbjct: 861 MDDFRGSCGSGKYPLINAMRQ 881


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 65  YLSVVIGYIYIYLFIEVDDVIFGLLVS 145
           +L+V++G+  IY+ + +  VIF   V+
Sbjct: 245 HLAVMLGFQDIYMIVYIIVVIFWYTVN 271


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 65  YLSVVIGYIYIYLFIEVDDVIFGLLVS 145
           +L+V++G+  IY+ + +  VIF   V+
Sbjct: 245 HLAVMLGFQDIYMIVYIIVVIFWYTVN 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,180
Number of Sequences: 336
Number of extensions: 3038
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)