Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C09
(580 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52720.1 68416.m05808 carbonic anhydrase family protein low s... 54 5e-08
At5g04180.1 68418.m00406 carbonic anhydrase family protein simil... 50 1e-06
At1g08065.1 68414.m00882 carbonic anhydrase family protein simil... 47 1e-05
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 42 2e-04
At3g52720.2 68416.m05809 carbonic anhydrase family protein low s... 41 7e-04
At2g28210.1 68415.m03425 carbonic anhydrase family protein simil... 39 0.002
At1g08080.1 68414.m00884 carbonic anhydrase family protein simil... 39 0.002
At4g21000.1 68417.m03039 carbonic anhydrase family protein simil... 39 0.003
At5g57390.1 68418.m07170 ovule development protein, putative sim... 31 0.56
At4g04970.1 68417.m00722 callose synthase, putative / 1,3-beta-g... 31 0.56
At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C... 29 3.0
At3g56980.1 68416.m06342 basic helix-loop-helix (bHLH) family pr... 28 3.9
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ... 28 5.2
At2g03140.1 68415.m00267 CAAX amino terminal protease family pro... 27 6.8
At1g16510.1 68414.m01974 auxin-responsive family protein similar... 27 9.0
>At3g52720.1 68416.m05808 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 284
Score = 54.4 bits (125), Expect = 5e-08
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = -1
Query: 412 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPL 233
T ++Y Y GSLTTPPC+E V+W I +S Q++ R S L+ +N R QPL
Sbjct: 201 TRKYYRYIGSLTTPPCSENVSWTILGKVRSMSKEQVELLR---SPLDTSFKNNSRPCQPL 257
Query: 232 FGRRV 218
GRRV
Sbjct: 258 NGRRV 262
>At5g04180.1 68418.m00406 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 277
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/70 (41%), Positives = 36/70 (51%)
Frame = -1
Query: 421 GLDTERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQL 242
G D +FY Y+GSLTTPPC E V W I + +S Q+D L N R
Sbjct: 191 GWDLTKFYEYRGSLTTPPCTEDVMWTIINKVGTVSREQID---VLTDARRGGYEKNARPA 247
Query: 241 QPLFGRRVFV 212
QPL GR V++
Sbjct: 248 QPLNGRLVYL 257
>At1g08065.1 68414.m00882 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 263
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = -1
Query: 580 QHPDGL-CVLAFFYQXVEFDAKLLS--PIVKNLTAIENFNSTLQLPHTFSLSSILSGLDT 410
Q DG V+AFFY+ + D LL+ +K +T +++ H + G ++
Sbjct: 136 QSKDGRNAVVAFFYKLGKPDYFLLTLERYLKRITDTHESQEFVEMVHPRTF-----GFES 190
Query: 409 ERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQM 305
+ +Y + GSLTTPPC+E V W I + +++ Q+
Sbjct: 191 KHYYRFIGSLTTPPCSENVIWTISKEMRTVTLKQL 225
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = -1
Query: 412 TERFYTYKGSLTTPPCAEAVTWVIFSDYLPISVFQMDNFRGLLSNLNLPLVDNFRQLQPL 233
T +FY Y GSLT PPC E V W + ++ M+ L ++ N R +Q
Sbjct: 199 TRKFYRYIGSLTVPPCTEGVIWTVVK---RVNTISMEQITALRQAVDDGFETNSRPVQDS 255
Query: 232 FGRRVF 215
GR V+
Sbjct: 256 KGRSVW 261
>At3g52720.2 68416.m05809 carbonic anhydrase family protein low
similarity to storage protein (dioscorin) [Dioscorea
cayenensis] GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 230
Score = 40.7 bits (91), Expect = 7e-04
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -1
Query: 412 TERFYTYKGSLTTPPCAEAVTWVI 341
T ++Y Y GSLTTPPC+E V+W I
Sbjct: 201 TRKYYRYIGSLTTPPCSENVSWTI 224
>At2g28210.1 68415.m03425 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 217
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -1
Query: 565 LCVLAFFYQXVEFDAKLLSPIVKNLTAIENFNSTLQLPHTFSLSSILSGLDTERFYTYKG 386
L V+ Y+ D+ L + L+AI + N + I G + +FY Y G
Sbjct: 131 LAVVTVLYKIGRPDS-FLGLLENKLSAITDQNEAEKYVDVIDPRDIKIG--SRKFYRYIG 187
Query: 385 SLTTPPCAEAVTWVI 341
SLTTPPC + V W +
Sbjct: 188 SLTTPPCTQNVIWTV 202
>At1g08080.1 68414.m00884 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 275
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 418 LDTERFYTYKGSLTTPPCAEAVTWVI 341
+ + ++Y Y GSLTTPPC + VTW +
Sbjct: 205 IGSRKYYRYTGSLTTPPCTQNVTWSV 230
>At4g21000.1 68417.m03039 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 260
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 415 DTERFYTYKGSLTTPPCAEAVTWVI 341
+T FY Y GSLT PPC E V W +
Sbjct: 199 ETNNFYRYIGSLTIPPCTEGVIWTV 223
>At5g57390.1 68418.m07170 ovule development protein, putative
similar to ovule development protein AINTEGUMENTA
(GI:1209099)[Arabidopsis thaliana]
Length = 555
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = -2
Query: 255 TSGSYNRCLVAVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPKMTSSTS 109
+S SY+ L SSS SHQ LS N+ N + +P +TSSTS
Sbjct: 10 SSSSYDSSLSPSSSSSSHQNWLSFSLSNN---NNNFNSSSNPNLTSSTS 55
>At4g04970.1 68417.m00722 callose synthase, putative /
1,3-beta-glucan synthase, putative similar to callose
synthase 1 catalytic subunit GI:13649388 from
[Arabidopsis thaliana]
Length = 1768
Score = 31.1 bits (67), Expect = 0.56
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 388 GSLTTPPCAEAVTWVIFSDYLPISV-FQMDNFRGLLSNLNLPLVDNFRQLQP 236
G L PP A+ + D+L + FQ+DN R NL L L ++ +LQP
Sbjct: 51 GDLPKPPFADFTPRMDLMDWLGLLFGFQIDNVRNQRENLVLHLANSQMRLQP 102
>At2g30020.1 68415.m03652 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C
(GI:4587992){Arabidopsis thaliana}
Length = 396
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 240 NRCLVAVSSSESHQRTLSSRRPNSTTPNGTGLDTRSPK 127
N+ + S ES TLS R+P +++P+ SPK
Sbjct: 22 NKSSILSSPQESLSLTLSHRKPQTSSPSSPSTTVSSPK 59
>At3g56980.1 68416.m06342 basic helix-loop-helix (bHLH) family
protein
Length = 258
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 451 HTFSLSSILSGLDTERF 401
H FS+S++LSGL+ +RF
Sbjct: 190 HNFSISNVLSGLEEDRF 206
>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 809
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 443 ESMRQLQSGVEVLDGR 490
E+ QLQSGVE+LDG+
Sbjct: 214 ENAEQLQSGVEILDGK 229
>At2g03140.1 68415.m00267 CAAX amino terminal protease family
protein very low similarity to SP|Q40863 Late
embryogenesis abundant protein EMB8 from Picea glauca;
contains Pfam profile PF02517 CAAX amino terminal
protease family protein
Length = 1805
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 113 VDDVIFG--LLVSNPVPFGVVEFGLLELRVL*CDSDEDTATKQRL 241
VDDV+ G +L + P PF F LL +L D D + + RL
Sbjct: 98 VDDVVVGEWILFTTPTPFN--RFVLLRCSLLSFDDDSEKSLSDRL 140
>At1g16510.1 68414.m01974 auxin-responsive family protein similar to
indole-3-acetic acid induced protein (SP:D14414) [Vigna
radiata.]; ESTs gb|AA712892 and gb|Z17613 come from this
gene
Length = 147
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 11 PPPLWSXWSVQRVTPVPYYLSVVIGYIYIYLFIEVDD-VIFGLLVSNPVPFGVV 169
PPP WS +RV VP G++ +Y+ E++ V+ L+++P+ G++
Sbjct: 39 PPPPWSICPARRVNTVP------AGHVPVYVGEEMERFVVSAELMNHPIFVGLL 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,763,067
Number of Sequences: 28952
Number of extensions: 276259
Number of successful extensions: 713
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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