Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C08
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.6  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   9.8  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -3

Query: 500 FFNEFYDSIIASVRLFCFNVNGLPTISNVLRYELYDV 390
           FF+   D+   ++ L C+ ++   TI + LR+E+ ++
Sbjct: 295 FFSAGNDTTSITLALTCYELSLNKTIQDRLRHEVTEI 331



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 509 PRIFFNEFYDSIIASVRLF 453
           P +FF  FY+ +I    +F
Sbjct: 34  PFLFFGSFYNLVIRKEHIF 52


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 149 CGIFVLCFRKGMKWKRAILKTH 84
           CG+F +C+ +     +A L++H
Sbjct: 150 CGLFSVCYPRVSAQMKADLRSH 171


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 361 YFSGCVTVERVNEKLTKF 308
           YF GCV    ++E++ KF
Sbjct: 94  YFVGCVESLLLSEEMPKF 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,399
Number of Sequences: 336
Number of extensions: 3231
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)