Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C08
         (706 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g14400.3 68417.m02222 ankyrin repeat family protein contains ...    29   2.3  
At4g14400.2 68417.m02221 ankyrin repeat family protein contains ...    29   2.3  
At4g14400.1 68417.m02220 ankyrin repeat family protein contains ...    29   2.3  
At4g14390.1 68417.m02219 ankyrin repeat family protein contains ...    28   5.2  
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ...    28   5.2  
At5g07130.1 68418.m00813 laccase, putative / diphenol oxidase, p...    28   6.9  
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill...    27   9.2  

>At4g14400.3 68417.m02222 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 604

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 84  VCFQNGSFPLHSFSETQH 137
           VC Q+GSFP+HS ++ +H
Sbjct: 259 VCDQDGSFPIHSAAKNEH 276


>At4g14400.2 68417.m02221 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 604

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 84  VCFQNGSFPLHSFSETQH 137
           VC Q+GSFP+HS ++ +H
Sbjct: 259 VCDQDGSFPIHSAAKNEH 276


>At4g14400.1 68417.m02220 ankyrin repeat family protein contains
           ankyrin repeats, Pfam domain PF00023
          Length = 670

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 84  VCFQNGSFPLHSFSETQH 137
           VC Q+GSFP+HS ++ +H
Sbjct: 325 VCDQDGSFPIHSAAKNEH 342


>At4g14390.1 68417.m02219 ankyrin repeat family protein contains
           Pfam profile: PF00023 ankyrin repeat
          Length = 694

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 84  VCFQNGSFPLHSFSETQHK 140
           VC Q+GSFP+H+ +E  H+
Sbjct: 354 VCDQDGSFPIHTAAEKGHE 372


>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 941

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = +1

Query: 37  KVVC--KCS---ALLLPWRSRCVFKMALFHFIP---FRKHNTNMPHNRLPVSINLLNSMQ 192
           K+ C  KCS    LLLP+       +  F F+P       +TNM    LP  I+ L S+Q
Sbjct: 614 KISCSSKCSNLSTLLLPYNKLVNISVGFFLFMPKLVVLDLSTNMSLIELPEEISNLCSLQ 673

Query: 193 YL 198
           YL
Sbjct: 674 YL 675


>At5g07130.1 68418.m00813 laccase, putative / diphenol oxidase,
           putative similar to laccase [Populus balsamifera subsp.
           trichocarpa][GI:3805960]
          Length = 484

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -2

Query: 150 MRHICVVFPKRNEVEKSHFENTPT 79
           + ++  VFPK+N + +++++ TPT
Sbjct: 304 INNVSFVFPKQNSIMQAYYQGTPT 327


>At1g44120.1 68414.m05096 C2 domain-containing protein /
            armadillo/beta-catenin repeat family protein similar to
            CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
            profiles PF00514: Armadillo/beta-catenin-like repeat,
            PF00168: C2 domain
          Length = 2114

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 47   VNAVHYYYPGGVGVFSKWLFSTS 115
            +N  HYY+   + V SK LFST+
Sbjct: 1649 INPEHYYFTVTIPVLSKMLFSTA 1671


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,351,850
Number of Sequences: 28952
Number of extensions: 247554
Number of successful extensions: 513
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)