Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_C06
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 31 0.59
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 31 0.59
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 31 0.59
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 31 0.59
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 30 1.8
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 30 1.8
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 29 3.2
Z19154-3|CAA79555.1| 291|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z73906-8|CAA98120.3| 511|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC084153-8|AAK84585.1| 380|Caenorhabditis elegans Hypothetical ... 28 7.3
AF039044-1|AAG24127.1| 272|Caenorhabditis elegans Hypothetical ... 27 9.6
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 662 IEAVTKVFDVVHKDTGKYFSVLCNIRCHEDQLNKNLHNSLRVSQVFDDTNKRLMS 498
I A+ DV HK +Y VL + + H DQL K + + + + + K L++
Sbjct: 222 IAALELELDVTHKKAEQYHEVLSSTKSHCDQLEKQNEQANYMIKNYQEREKELLN 276
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 662 IEAVTKVFDVVHKDTGKYFSVLCNIRCHEDQLNKNLHNSLRVSQVFDDTNKRLMS 498
I A+ DV HK +Y VL + + H DQL K + + + + + K L++
Sbjct: 256 IAALELELDVTHKKAEQYHEVLSSTKSHCDQLEKQNEQANYMIKNYQEREKELLN 310
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 662 IEAVTKVFDVVHKDTGKYFSVLCNIRCHEDQLNKNLHNSLRVSQVFDDTNKRLMS 498
I A+ DV HK +Y VL + + H DQL K + + + + + K L++
Sbjct: 353 IAALELELDVTHKKAEQYHEVLSSTKSHCDQLEKQNEQANYMIKNYQEREKELLN 407
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 662 IEAVTKVFDVVHKDTGKYFSVLCNIRCHEDQLNKNLHNSLRVSQVFDDTNKRLMS 498
I A+ DV HK +Y VL + + H DQL K + + + + + K L++
Sbjct: 416 IAALELELDVTHKKAEQYHEVLSSTKSHCDQLEKQNEQANYMIKNYQEREKELLN 470
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 29.9 bits (64), Expect = 1.8
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = -2
Query: 380 NGTDDQQNEPTNLLDLQFYSPEYLSVITTHPENEENTIFIQVPVKHLLENSTELNINTKS 201
N T+DQ+ LL+ + S S + T + EN I Q V+H EN+ ++NI S
Sbjct: 1983 NTTNDQEKVAV-LLNEKIDS--IYSSLNTLAASMENEIISQELVRHT-ENAGKVNIKPIS 2038
Query: 200 CIFTDRSVKKDIAPLLEQNVYKVLEKMDGSRLAVSGGRKVAVILSKSSRKV 48
S K + L+Q + VLEKMD S++++ + I+SK+ R +
Sbjct: 2039 PRELVSSSFKITSSDLQQ-FFNVLEKMDWSQISLPA--QEHAIISKNVRSL 2086
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 29.9 bits (64), Expect = 1.8
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = -2
Query: 380 NGTDDQQNEPTNLLDLQFYSPEYLSVITTHPENEENTIFIQVPVKHLLENSTELNINTKS 201
N T+DQ+ LL+ + S S + T + EN I Q V+H EN+ ++NI S
Sbjct: 1983 NTTNDQEKVAV-LLNEKIDS--IYSSLNTLAASMENEIISQELVRHT-ENAGKVNIKPIS 2038
Query: 200 CIFTDRSVKKDIAPLLEQNVYKVLEKMDGSRLAVSGGRKVAVILSKSSRKV 48
S K + L+Q + VLEKMD S++++ + I+SK+ R +
Sbjct: 2039 PRELVSSSFKITSSDLQQ-FFNVLEKMDWSQISLPA--QEHAIISKNVRSL 2086
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 359 FVDHQCHFELNKKKSSIS*LQYYKISPLY*QPKNKFLLFHLIYPK 493
F D Q H N+KK I L+YY+I+ +P LL L + K
Sbjct: 36 FADMQNHNTQNEKKGIIRYLEYYEINSQSTRPYPNLLLNKLSFSK 80
>Z19154-3|CAA79555.1| 291|Caenorhabditis elegans Hypothetical
protein C40H1.4 protein.
Length = 291
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 321 PRIFVSYYNTS*K*GKYNIYSGTSKTSPGKFY--*TQY*HKILYFY*QKCKEGY 166
P IF+ YY+ + Y ++SG T+ G+FY + H ++Y Y GY
Sbjct: 157 PLIFLHYYHHA-AVLIYTVHSGAEHTAAGRFYILMNYFAHSLMYTYYTVSAMGY 209
>Z73906-8|CAA98120.3| 511|Caenorhabditis elegans Hypothetical
protein D2030.8 protein.
Length = 511
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 9 FIIITINFHFKYSNFSRTF*KDNSYFTT 92
F ++ ++FHF+ SNF KD +F T
Sbjct: 263 FDVLDLSFHFRLSNFQAFRIKDGVHFNT 290
>AC084153-8|AAK84585.1| 380|Caenorhabditis elegans Hypothetical
protein Y22D7AL.11 protein.
Length = 380
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 485 ISNGKEGIYFLAVNIKERSCNIAVMKCYFSSYLV 384
IS E Y L V+ K+ +CNI + +FS+ +
Sbjct: 38 ISKNDECFYLLEVSTKKTTCNIYLCSYWFSTIFI 71
>AF039044-1|AAG24127.1| 272|Caenorhabditis elegans Hypothetical
protein F48G7.13 protein.
Length = 272
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 175 FTLLSVKIQDFVLILSSVEFSR 240
F L S+KIQDF++ SS +F +
Sbjct: 71 FQLTSLKIQDFIIFCSSRDFDK 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,145,742
Number of Sequences: 27780
Number of extensions: 326118
Number of successful extensions: 928
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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