Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C05
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 383 TLITTHVITPKC 418
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 383 TLITTHVITPKC 418
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 383 TLITTHVITPKC 418
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 383 TLITTHVITPKC 418
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +1

Query: 358 FNKWNRYLYFNHYT 399
           FNKWN++  +++++
Sbjct: 61  FNKWNQFRSYSNFS 74


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 29  PANTVRIAILHFDND 73
           PA+ V IA L+ DND
Sbjct: 542 PASAVGIAWLYVDND 556


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,062
Number of Sequences: 336
Number of extensions: 2951
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)