Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C04
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q234C7 Cluster: Protein kinase domain containing protei...    36   1.0  

>UniRef50_Q234C7 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 573

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
 Frame = +3

Query: 306 NILYSINFYYHSRDRAKI*NYNYTACL*HNIQKLGQLIDSFSIVKFFF*NIDVNNIR--- 476
           NI+   +FY    D   I  Y    CL   IQKL +   +FSI+KF F NI +  ++   
Sbjct: 138 NIIRIFDFYQDEEDFYIITEYIEGGCLFDEIQKLSKRYFNFSIIKFDF-NISLKKLKQQF 196

Query: 477 -K*HLPEIFLSVTLIFTLYHNISV 545
            + H  +I   + +     H+I++
Sbjct: 197 NEYHACQIMQQILMAVNYAHSINI 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,486,464
Number of Sequences: 1657284
Number of extensions: 9838337
Number of successful extensions: 20963
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20950
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)