Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C04
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    26   0.28 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 297 CMFNILYSINFYYHSRDRAKI*NYNYT 377
           C F  L+++ + Y+S   A I N+ YT
Sbjct: 148 CYFIYLFTVYYIYYSVHEASIINFGYT 174


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 568 HSFVLVSETEMLWYNVKINVTLRNISGKCYFL 473
           +S + V      WY +  N+T  N + K Y+L
Sbjct: 27  YSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWL 58


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = -2

Query: 592 LFDAVFL-YHSFVLVSE---TEMLWYNVKIN 512
           +FD +FL +    L  E   T  LWY++KI+
Sbjct: 147 IFDLIFLSFRCTKLCKEANKTAFLWYHIKID 177


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 484 ICLRYFSVSR*FLHCTITFQS 546
           +CL YF++   FL C   F S
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYS 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,935
Number of Sequences: 336
Number of extensions: 2892
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)