Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C03
         (339 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   8.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   8.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   8.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   8.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249  SMLFFCGSPNFIIA 290
            S+ FFC +  FIIA
Sbjct: 978  SLFFFCMAAEFIIA 991


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249  SMLFFCGSPNFIIA 290
            S+ FFC +  FIIA
Sbjct: 978  SLFFFCMAAEFIIA 991


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 166 IFCCSFQQGLLSVFFNCKQNLC 231
           +F   F QGL S  FN     C
Sbjct: 141 VFILFFAQGLTSPIFNLVYVYC 162


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 44  LSIISKGTA--LXVNHHXXRQHVAYTLDTIAINY 139
           +SII+ GTA  + V H   R+   YT+  + ++Y
Sbjct: 51  VSIIAAGTAYSIYVRHTYYRR--LYTITHLVLDY 82


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 194 CCLFFLIANKIFVRRSNDFNAVFLWLTKFYN 286
           C LF ++  K+ + +    +   L +TK  N
Sbjct: 54  CSLFIVVILKLILAKYRQQDVTLLQITKAKN 84


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 44  LSIISKGTA--LXVNHHXXRQHVAYTLDTIAINY 139
           +SII+ GTA  + V H   R+   YT+  + ++Y
Sbjct: 51  VSIIAAGTAYSIYVRHTYYRR--LYTITHLVLDY 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,535
Number of Sequences: 336
Number of extensions: 1536
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)