Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_C03
         (339 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0394 - 17633753-17636788                                         27   2.8  
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183...    27   3.8  
02_05_0120 - 26004779-26004882,26005201-26005387                       27   5.0  
04_04_1636 + 34951841-34954322,34954440-34954627,34955737-349558...    26   6.6  
11_05_0080 + 18920341-18921009                                         26   8.7  
08_02_0901 + 22407216-22407677                                         26   8.7  
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520...    26   8.7  
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    26   8.7  

>07_03_0394 - 17633753-17636788
          Length = 1011

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 230 QRFCLQLKKTDSNPCWNEQ 174
           Q+F   +K+ D NP WNEQ
Sbjct: 36  QKFRTAIKERDINPVWNEQ 54


>02_05_0566 -
           30017031-30017309,30018077-30018172,30018261-30018377,
           30018538-30018667,30018866-30019029,30019480-30019485
          Length = 263

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 239 IGVQRFCLQLKKTDSNPCWNEQQKIFI 159
           +G Q+    +K +D NP WNE  KI I
Sbjct: 136 LGEQKAQTTVKPSDLNPVWNEVLKISI 162


>02_05_0120 - 26004779-26004882,26005201-26005387
          Length = 96

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 83  HHXXRQHVAYTLDTIAINYTK 145
           HH  + HV   LD  ++NYTK
Sbjct: 29  HHNVKTHVPVILDMKSLNYTK 49


>04_04_1636 +
           34951841-34954322,34954440-34954627,34955737-34955838,
           34956101-34956177,34956258-34956319,34956504-34956511
          Length = 972

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 230 QRFCLQLKKTDSNPCWNEQ 174
           QRF   +K  D NP WNE+
Sbjct: 36  QRFRTAIKDKDLNPVWNER 54


>11_05_0080 + 18920341-18921009
          Length = 222

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 258 FFCGSPNFIIAEHFSTSLL 314
           FFC SP+ I+A  F T LL
Sbjct: 47  FFCKSPSTIMASDFKTLLL 65


>08_02_0901 + 22407216-22407677
          Length = 153

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 254 AVFLWLTKFYNCRTFQY-FSIIH 319
           A  +WLTK + C T Q+  +I+H
Sbjct: 110 AWLVWLTKVFTCGTLQFGLNIVH 132


>03_06_0326 +
           33150599-33150907,33151013-33151104,33151961-33152057,
           33152585-33152656,33152750-33152812,33152905-33153045,
           33153603-33153698,33154120-33154404,33154692-33154851,
           33154947-33155089,33155688-33155861,33156386-33156652,
           33156737-33156856
          Length = 672

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 163 KIFCCSFQQGLLSVFFNCKQ 222
           K F C+F++G+L ++FN K+
Sbjct: 648 KGFKCTFERGILHLYFNFKR 667


>03_05_1143 + 30709825-30709926,30710105-30710260,30710356-30710439,
            30710769-30710882,30711019-30711111,30711888-30711977,
            30712157-30712227,30712300-30712374,30712481-30712568,
            30712748-30712806,30712893-30712956,30713030-30713095,
            30713283-30713435,30713522-30713626,30713739-30713974,
            30714104-30714173,30714286-30714339,30714501-30714557,
            30714662-30714741,30716056-30717919
          Length = 1226

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = -1

Query: 252  LKSFDRRTKILFAIKKNRQQSLL 184
            L+S + RTK+L  +KK+R+Q ++
Sbjct: 1047 LRSEEERTKLLSELKKSREQLIM 1069


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,318,671
Number of Sequences: 37544
Number of extensions: 115601
Number of successful extensions: 209
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)