Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B24
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   2.9  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    23   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.7  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 49  CTKCRYCCVQQSL 11
           C KC Y CV +S+
Sbjct: 261 CNKCDYTCVNKSM 273


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 49 CTKCRYCCVQQSL 11
          C KC Y CV +S+
Sbjct: 19 CNKCDYTCVNKSM 31


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 495 RVETLESSSSITSDCIQVQSEKPAAAST 412
           RV   ESSS +TS    V S   + AST
Sbjct: 8   RVAPEESSSEVTSSSALVMSPANSLAST 35


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 223 HISLIIPWLYIQNNIRLCN*HWLFSFLCIICSKTLFLYLSCFST-LLF 363
           H+    P++    +  LC  ++ ++F+ ++C    +     F+  LLF
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 31  NIDTLYIVFIFLDFLCKPINR 93
           N+D +  ++  L F+CK IN+
Sbjct: 210 NLDLVLPIYSQLVFMCKKINK 230


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -3

Query: 197 QSALMASCGVPLN*CLWLMVSISCKFPVLLK--MIRFLLIGL 78
           +S   ASC       LW  +    K P+L+K  +++ L+I L
Sbjct: 386 KSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISL 427


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -3

Query: 197 QSALMASCGVPLN*CLWLMVSISCKFPVLLK--MIRFLLIGL 78
           +S   ASC       LW  +    K P+L+K  +++ L+I L
Sbjct: 386 KSPYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISL 427


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 75  EEIEKNEDYVQSVDIAAFNKV 13
           E++   EDY + VD+ A  K+
Sbjct: 215 EDVPGCEDYYKDVDLKALKKL 235


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -2

Query: 630 MDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLR 520
           +DS+ +    P+   + K+  L  E   +K+ ++DL+
Sbjct: 273 LDSLVSSRAWPSRVANQKLRDLNREVDQIKQDVEDLK 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,935
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)