Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B24
(817 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59042| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 2e-40
SB_42516| Best HMM Match : EF1_GNE (HMM E-Value=3.3e-05) 50 2e-06
SB_15649| Best HMM Match : EF1_GNE (HMM E-Value=0.025) 47 2e-05
SB_18298| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 36 0.052
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_34347| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 31 1.5
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05) 30 2.0
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058) 29 4.5
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 4.5
SB_47025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_27552| Best HMM Match : Phage_integrase (HMM E-Value=0.31) 29 6.0
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 29 6.0
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_59042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 163 bits (396), Expect = 2e-40
Identities = 79/104 (75%), Positives = 89/104 (85%)
Frame = -2
Query: 324 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAVRSISTDGLLWGAAKLVPLA 145
RL AY KKAKK +IAKSNI+LDVKPWDDETDMA +E+ VRSI DGLLWGA+KLVPLA
Sbjct: 122 RLKAYEEKKAKKKPVIAKSNIMLDVKPWDDETDMAEMEKLVRSIQADGLLWGASKLVPLA 181
Query: 144 YGIHKLQISCVVEDDKVSIDWLTEEIEKNEDYVQSVDIAAFNKV 13
YGI KLQI+ VVEDDK+S D+L EEI K ED+VQSVDIAAFNK+
Sbjct: 182 YGIKKLQITVVVEDDKISTDFLEEEICKFEDFVQSVDIAAFNKI 225
>SB_42516| Best HMM Match : EF1_GNE (HMM E-Value=3.3e-05)
Length = 416
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = -2
Query: 324 RLAAYNAKKAKKPVLIAKSN---IILDVKPWDDETDMAALEQA-VRSISTDGLLWGAAKL 157
R+ A+ K +KP K + +D+ DDE + Q + ++ KL
Sbjct: 59 RIKAFAKKPEEKPAAAKKEDDDDSDIDLFGSDDEEEAEEARQLREKRLAEYNAKKATTKL 118
Query: 156 VPLAYGIHKLQISCVVEDDKVSIDWLTEEIEKNEDY 49
V +AYG+ KLQI+CV+ED KVS D L +++ + ED+
Sbjct: 119 VEIAYGLKKLQITCVIEDAKVSTDDLIDKLCEFEDF 154
>SB_15649| Best HMM Match : EF1_GNE (HMM E-Value=0.025)
Length = 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = -2
Query: 162 KLVPLAYGIHKLQISCVVEDDKVSIDWLTEEIEKNEDY 49
KLV +AYG+ KLQI+CV+ED KVS D L +++ + ED+
Sbjct: 2 KLVEIAYGLKKLQITCVIEDAKVSTDDLIDKLCEFEDF 39
>SB_18298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 35.9 bits (79), Expect = 0.039
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = -2
Query: 675 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISL--ENENKDLKKAIDDLRNLVISL 502
++AK R+ + +L D+ L + T+L + SL E EN+ LKK DL+ + L
Sbjct: 120 DIAKPRRKLTRTLSLPDN--ELHQIDATDLHERFTSLQLEQENRSLKKLTSDLQEALEKL 177
Query: 501 QVRVETLESSSSITSDCIQ-VQSEKPAAAST 412
+ +V ++ I D + Q P A T
Sbjct: 178 EEKVNDMQRGERIERDSLDGFQISAPPAKPT 208
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 35.5 bits (78), Expect = 0.052
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = -2
Query: 675 EVAKARQHIKN-SLECMDSVATLAGV-PN-TELSTKVISLENENKDLKKAIDDLRNLVIS 505
++A R + N + E D ++ LA P +L K+ +N LK IDDLRN + S
Sbjct: 2283 DLAALRNEMDNMNAEKRDHMSELARAQPQIADLENKLQDAREQNSRLKIEIDDLRNKLSS 2342
Query: 504 LQVRVETLESSSSITSD 454
+ R E +E+ ++I D
Sbjct: 2343 AKSRYERVETETTIVRD 2359
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -2
Query: 594 TELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLES 475
+E +N+N +K IDDL+N + L+ ++ L++
Sbjct: 529 SEAQRNAEKFKNDNVRKQKTIDDLKNTIAQLEDKINALDN 568
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = -2
Query: 657 QHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLE 478
Q +K +LE V E+S+ + EN+ ++K + + + + +L+++VE LE
Sbjct: 748 QQLKENLENGQEVLKRKDTTIQEISSALKEAENKLSGVEKQMAEKSSSINALELKVEDLE 807
Query: 477 SSSSITSDCIQVQSEK 430
+S CI+ + EK
Sbjct: 808 ASIQEQLVCIKAKKEK 823
>SB_34347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -2
Query: 564 ENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKPA 424
E E KDLKK I L + + +L+ +V T+++S + ++E+PA
Sbjct: 134 EEEVKDLKKTISKLHSEISALKKQVGTIKTSLEFLETSVINEAEEPA 180
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -2
Query: 660 RQHIKNSLECMDSVATL--AGVPNTELSTKVISLENENKDLK-KAIDDLRNLVISLQVRV 490
R+ + +S++ D VA L A T+ +V++ + ++ KAI L N V SLQ ++
Sbjct: 549 REKLSSSVQIHDKVAELEQALKAKTDELDQVLACQKGKDEVHDKAIAHLTNEVTSLQKQI 608
Query: 489 ETLESSSSITSDCIQ 445
+ LE +S S ++
Sbjct: 609 DILEDNSQSESSMVE 623
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = -2
Query: 666 KARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 487
K R+ +KN + T E+ ++ LE ENK L I+D + + L+
Sbjct: 477 KDREDLKNECLALSETVTKIANEKREMEKEIEKLEEENKKLVSEINDFKVNIQKLESLKG 536
Query: 486 TLESSSSITSDCIQVQSE 433
E + S I++ S+
Sbjct: 537 EKEELDNAHSKIIEMYSD 554
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -2
Query: 597 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEKP 427
N +L ++ + EN++L+ ++ + + ++ +ET SSSITS + + P
Sbjct: 1985 NAKLKVELKDINVENEELQSQLELTKEELTRVEALLETYRKSSSITSSTPSILQKSP 2041
>SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05)
Length = 462
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 591 ELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETL 481
+L ++ +SLE ENK LK I+DL +L+ R L
Sbjct: 139 KLESEKLSLERENKKLKHQIEDLESLLSHKTARATKL 175
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 567 LENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEK 430
L E KDL K I+DL+ + L++ + TL+ + S K
Sbjct: 257 LNQEKKDLVKKINDLKKRITELELIINTLKDEKEALEQDVNSMSYK 302
>SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058)
Length = 1083
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 585 STKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQ 445
S K LE EN DL++++ + + + SLQ R LE + IQ
Sbjct: 283 SEKYKLLEKENADLRQSVSETQEVANSLQNRNSLLEREKQSLEENIQ 329
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 591 ELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSS 466
+L KV +EN+ L +DDLR + Q +++LE +S+
Sbjct: 3043 DLHGKVSQKNSENELLHAQLDDLRKQITGYQGNIKSLEENSN 3084
>SB_47025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 10 LDFVERSNIDTLYIVFIFLDFL----CKPINRNLIIFNNTGNLQLMDTISQRH 156
+DF +N TLY F+F FL + R++ FN T +L D + H
Sbjct: 687 VDFQHDANSSTLYCAFLFAFFLMARIANIVPRSIKAFNPTRDLTRGDVLCNEH 739
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = -2
Query: 570 SLENENKDLKKAIDDLRNLVISL-QVRVETLESSSSITSDCIQVQSEKPAAAS 415
SLE +NKDLK+ + DL + S ++ + +LES + + + +++++ A S
Sbjct: 1627 SLEKQNKDLKQKLADLESSTRSRHKMAIASLESKLTNMQEQLDLETKERALQS 1679
>SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 10 LDFVERSNIDTLYIVFIFLDFL----CKPINRNLIIFNNTGNLQLMDTISQRH 156
+DF +N TLY F+F FL + R++ FN T +L D + H
Sbjct: 55 VDFQHDANSSTLYCAFLFAFFLMARIANIVPRSIKAFNPTRDLTRGDVLCNEH 107
>SB_27552| Best HMM Match : Phage_integrase (HMM E-Value=0.31)
Length = 270
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 10 LDFVERSNIDTLYIVFIFLDFL----CKPINRNLIIFNNTGNLQLMDTISQRH 156
+DF +N TLY F+F FL + R++ FN T +L D + H
Sbjct: 70 VDFQHDANSSTLYCAFLFAFFLMARIANIVPRSIKAFNPTRDLTRGDVLCNEH 122
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 636 ECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLR 520
E M+ A L + E S V+ L +N+ LKK+++DLR
Sbjct: 352 EVMEENAQLV-IDKQESSMDVLRLSQQNQHLKKSLEDLR 389
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 153 PLAYGIHKLQISCVVEDDKVSIDWLTEEIEKNED 52
P+A+G L + CVV D +I W+ EI NE+
Sbjct: 218 PMAWGWGMLTLCCVVNDS--TIVWVPTEITLNEE 249
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 588 LSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLESSSSITSDCIQVQSEK 430
L K+ +LENEN+DL K +L ++ + E ++ T +++ EK
Sbjct: 2830 LLEKIEALENENRDLVKQCKELSRNLLERRRETEAVKKEMVATEKKVKLFLEK 2882
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,429,492
Number of Sequences: 59808
Number of extensions: 384823
Number of successful extensions: 1023
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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