Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B24
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    31   0.032
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   1.6  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   3.7  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    24   6.4  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   8.5  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 31.5 bits (68), Expect = 0.032
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -2

Query: 636  ECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLR 520
            EC + +A L  +PN + S + +SL++  K+L+KA   L+
Sbjct: 938  ECTEKIAGLGALPNVDASYQKMSLKSLFKELEKANQHLK 976


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 321 LAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAVRSIST 187
           L+  N  KA     +A       V  W + TD+ ALE+ +R +ST
Sbjct: 819 LSVGNKVKAINTFAVALLTYSFGVMKWSN-TDLEALERTIRVVST 862


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 651 IKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDD 526
           IK++L   D + T     +T +STK   +++EN    K IDD
Sbjct: 137 IKSALPVEDELRT-----DTGISTKYDEIDDENPKFDKNIDD 173


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 450 YNQR*YCWMIPRFQHG 497
           YN   YCWM  RF+ G
Sbjct: 349 YNPIIYCWMNLRFRRG 364


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 85  LAYRGNREK*RLCTKCRYCCVQQS 14
           + YR   E+   CT+C Y  V+ S
Sbjct: 202 IRYRHTHERPHKCTECDYASVELS 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,576
Number of Sequences: 2352
Number of extensions: 12783
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)