Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B18
         (667 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0487 - 25585229-25585540,25585627-25585745,25586029-255861...    29   3.3  
12_02_0860 - 23761866-23762966                                         29   4.4  

>04_04_0487 -
           25585229-25585540,25585627-25585745,25586029-25586194,
           25586295-25586427,25586527-25586618,25586739-25586925,
           25587183-25587271,25587318-25587379,25587462-25587567,
           25587754-25588052,25588181-25588288,25588369-25588439,
           25588792-25588871
          Length = 607

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
 Frame = -1

Query: 235 QTTLPVVKCTVHEQDDGTIVAVCATGSSSRD-SLLSWIRLLEKYDNSVLSNLPVIFTLTA 59
           + T PV KC      DG   A+C +   S+D    S +  +     S+ S +  + T   
Sbjct: 21  ELTCPVCKCATTRTMDGYSCAICKSAYRSQDLRPASHLEAIVNIHRSLSSTVSSMVTQQE 80

Query: 58  PSNDVVVQET--QPAAEXGKR 2
              D+ V +T  Q   E G R
Sbjct: 81  AQADIPVAKTSFQGTPESGNR 101


>12_02_0860 - 23761866-23762966
          Length = 366

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 511 MKIEIWQTEEIEACIDKTWIVSAQSETQKILLSEQ 407
           ++ E+W  EE +A +DK   V  + + +K LLS Q
Sbjct: 173 IRTEVWSEEEAKARVDKVEQVRQRRKAEKSLLSLQ 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,668,448
Number of Sequences: 37544
Number of extensions: 328952
Number of successful extensions: 914
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)