BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_pT_B18 (667 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC006720-1|AAF60446.1| 350|Caenorhabditis elegans Hypothetical ... 67 9e-12 AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 29 3.0 Z81534-5|CAB04348.2| 694|Caenorhabditis elegans Hypothetical pr... 28 6.8 Z47074-2|CAA87377.2| 694|Caenorhabditis elegans Hypothetical pr... 28 6.8 U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical pr... 28 6.8 AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical... 28 6.8 AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 28 6.8 AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 28 6.8 AC006747-2|AAF60508.1| 264|Caenorhabditis elegans Hypothetical ... 27 9.1 >AC006720-1|AAF60446.1| 350|Caenorhabditis elegans Hypothetical protein Y17G9B.5 protein. Length = 350 Score = 67.3 bits (157), Expect = 9e-12 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 3/191 (1%) Frame = -1 Query: 646 KFWRMLYWMPKFKNLSPWYLPDELPNDTL---ELAKMAIHRITSVDPTMKIEIWQTEEIE 476 K RMLYWMPK K+ + + + +L ELA +A+ ++ S D I + + + Sbjct: 152 KVKRMLYWMPKLKHSNKYLDRRHVEGKSLSPSELAGIAL-KMMSRDAASSISLLKLSDSS 210 Query: 475 ACIDKTWIVSAQSETQKILLSEQPPDEPLVVRGPYEVYLKEQVVTYFTLLGKVRPEHKDD 296 K W+ ++QS Q+IL+SE + + V +VYL+++V+ + TL G + E ++ Sbjct: 211 DPQQK-WLATSQSPMQQILISELRKGDEVFVDAA-KVYLQDRVIPFITLTGNTKLEPLNE 268 Query: 295 FDQDDVSNLKKPSGIPGFIGQTTLPVVKCTVHEQDDGTIVAVCATGSSSRDSLLSWIRLL 116 F +D+ + + Q K ++HEQD TI A+ A + + WI L Sbjct: 269 FKNEDMDE-DYTNWYADW--QKQRGEAKRSIHEQDHETIFAMGAMYKDDNATAIRWIDNL 325 Query: 115 EKYDNSVLSNL 83 +K N + NL Sbjct: 326 QK-TNPNMENL 335 >AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical protein F54A3.6 protein. Length = 470 Score = 29.1 bits (62), Expect = 3.0 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = -1 Query: 448 SAQSETQKILLSEQPPDEPLVVRGP---YEVYLKEQVVTYFTLLGKVRP 311 S Q+ +K L+ +PP +P++ R P YE+Y K+ + GK P Sbjct: 276 SYQNNIKKALIPGKPPGQPIIRRKPASWYEMYKKQVDSLKEQVYGKPNP 324 >Z81534-5|CAB04348.2| 694|Caenorhabditis elegans Hypothetical protein F37H8.2 protein. Length = 694 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +3 Query: 396 SSGGCSESNIFCVS-LWALTIHVLSMQASISSVCQISI 506 +S GC +SNI+ S + L +H+L +S Q+SI Sbjct: 436 TSSGCKKSNIYLPSVMLLLKLHILFSDVRATSSTQLSI 473 >Z47074-2|CAA87377.2| 694|Caenorhabditis elegans Hypothetical protein F37H8.2 protein. Length = 694 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +3 Query: 396 SSGGCSESNIFCVS-LWALTIHVLSMQASISSVCQISI 506 +S GC +SNI+ S + L +H+L +S Q+SI Sbjct: 436 TSSGCKKSNIYLPSVMLLLKLHILFSDVRATSSTQLSI 473 >U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical protein T10E9.3 protein. Length = 583 Score = 27.9 bits (59), Expect = 6.8 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = -1 Query: 205 VHEQDDGTIVAVCATGSSSRDSLLSW 128 V Q+DG + +C+TG + + + W Sbjct: 186 VKRQEDGDVAPICSTGGEDQKNRIEW 211 >AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical protein Y37D8A.23c protein. Length = 433 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = -1 Query: 619 PKFKNLSPWYLPDELPNDTLELAKMAIHRITSVDPTMKIEIWQ 491 P+F N+ WY+P ++ N LE A+M R+ + P +K + Q Sbjct: 347 PEFLNICFWYVPSKIRN--LEPAEMRA-RLEKIAPKIKAGMMQ 386 >AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical protein Y37D8A.23a protein. Length = 508 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = -1 Query: 619 PKFKNLSPWYLPDELPNDTLELAKMAIHRITSVDPTMKIEIWQ 491 P+F N+ WY+P ++ N LE A+M R+ + P +K + Q Sbjct: 422 PEFLNICFWYVPSKIRN--LEPAEMRA-RLEKIAPKIKAGMMQ 461 >AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid decarboxylase protein. Length = 508 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = -1 Query: 619 PKFKNLSPWYLPDELPNDTLELAKMAIHRITSVDPTMKIEIWQ 491 P+F N+ WY+P ++ N LE A+M R+ + P +K + Q Sbjct: 422 PEFLNICFWYVPSKIRN--LEPAEMRA-RLEKIAPKIKAGMMQ 461 >AC006747-2|AAF60508.1| 264|Caenorhabditis elegans Hypothetical protein Y39A3A.2 protein. Length = 264 Score = 27.5 bits (58), Expect = 9.1 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +3 Query: 87 FDRTELSYFSNNLIHDNKESRDD 155 F+ TEL + +N++IH+ K S DD Sbjct: 100 FNTTELEWLNNDVIHNLKFSTDD 122 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,871,712 Number of Sequences: 27780 Number of extensions: 311283 Number of successful extensions: 981 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 896 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 980 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1497472076 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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