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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B18
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006720-1|AAF60446.1|  350|Caenorhabditis elegans Hypothetical ...    67   9e-12
AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL032626-21|CAD45606.2|  433|Caenorhabditis elegans Hypothetical...    28   6.8  
AL032626-19|CAA21537.1|  508|Caenorhabditis elegans Hypothetical...    28   6.8  
AF109378-1|AAD19958.1|  508|Caenorhabditis elegans glutamic acid...    28   6.8  
AC006747-2|AAF60508.1|  264|Caenorhabditis elegans Hypothetical ...    27   9.1  

>AC006720-1|AAF60446.1|  350|Caenorhabditis elegans Hypothetical
           protein Y17G9B.5 protein.
          Length = 350

 Score = 67.3 bits (157), Expect = 9e-12
 Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
 Frame = -1

Query: 646 KFWRMLYWMPKFKNLSPWYLPDELPNDTL---ELAKMAIHRITSVDPTMKIEIWQTEEIE 476
           K  RMLYWMPK K+ + +     +   +L   ELA +A+ ++ S D    I + +  +  
Sbjct: 152 KVKRMLYWMPKLKHSNKYLDRRHVEGKSLSPSELAGIAL-KMMSRDAASSISLLKLSDSS 210

Query: 475 ACIDKTWIVSAQSETQKILLSEQPPDEPLVVRGPYEVYLKEQVVTYFTLLGKVRPEHKDD 296
               K W+ ++QS  Q+IL+SE    + + V    +VYL+++V+ + TL G  + E  ++
Sbjct: 211 DPQQK-WLATSQSPMQQILISELRKGDEVFVDAA-KVYLQDRVIPFITLTGNTKLEPLNE 268

Query: 295 FDQDDVSNLKKPSGIPGFIGQTTLPVVKCTVHEQDDGTIVAVCATGSSSRDSLLSWIRLL 116
           F  +D+      +    +  Q      K ++HEQD  TI A+ A       + + WI  L
Sbjct: 269 FKNEDMDE-DYTNWYADW--QKQRGEAKRSIHEQDHETIFAMGAMYKDDNATAIRWIDNL 325

Query: 115 EKYDNSVLSNL 83
           +K  N  + NL
Sbjct: 326 QK-TNPNMENL 335


>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -1

Query: 448 SAQSETQKILLSEQPPDEPLVVRGP---YEVYLKEQVVTYFTLLGKVRP 311
           S Q+  +K L+  +PP +P++ R P   YE+Y K+       + GK  P
Sbjct: 276 SYQNNIKKALIPGKPPGQPIIRRKPASWYEMYKKQVDSLKEQVYGKPNP 324


>Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 396 SSGGCSESNIFCVS-LWALTIHVLSMQASISSVCQISI 506
           +S GC +SNI+  S +  L +H+L      +S  Q+SI
Sbjct: 436 TSSGCKKSNIYLPSVMLLLKLHILFSDVRATSSTQLSI 473


>Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 396 SSGGCSESNIFCVS-LWALTIHVLSMQASISSVCQISI 506
           +S GC +SNI+  S +  L +H+L      +S  Q+SI
Sbjct: 436 TSSGCKKSNIYLPSVMLLLKLHILFSDVRATSSTQLSI 473


>U97403-6|AAB52471.2|  583|Caenorhabditis elegans Hypothetical
           protein T10E9.3 protein.
          Length = 583

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 205 VHEQDDGTIVAVCATGSSSRDSLLSW 128
           V  Q+DG +  +C+TG   + + + W
Sbjct: 186 VKRQEDGDVAPICSTGGEDQKNRIEW 211


>AL032626-21|CAD45606.2|  433|Caenorhabditis elegans Hypothetical
           protein Y37D8A.23c protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 619 PKFKNLSPWYLPDELPNDTLELAKMAIHRITSVDPTMKIEIWQ 491
           P+F N+  WY+P ++ N  LE A+M   R+  + P +K  + Q
Sbjct: 347 PEFLNICFWYVPSKIRN--LEPAEMRA-RLEKIAPKIKAGMMQ 386


>AL032626-19|CAA21537.1|  508|Caenorhabditis elegans Hypothetical
           protein Y37D8A.23a protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 619 PKFKNLSPWYLPDELPNDTLELAKMAIHRITSVDPTMKIEIWQ 491
           P+F N+  WY+P ++ N  LE A+M   R+  + P +K  + Q
Sbjct: 422 PEFLNICFWYVPSKIRN--LEPAEMRA-RLEKIAPKIKAGMMQ 461


>AF109378-1|AAD19958.1|  508|Caenorhabditis elegans glutamic acid
           decarboxylase protein.
          Length = 508

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 619 PKFKNLSPWYLPDELPNDTLELAKMAIHRITSVDPTMKIEIWQ 491
           P+F N+  WY+P ++ N  LE A+M   R+  + P +K  + Q
Sbjct: 422 PEFLNICFWYVPSKIRN--LEPAEMRA-RLEKIAPKIKAGMMQ 461


>AC006747-2|AAF60508.1|  264|Caenorhabditis elegans Hypothetical
           protein Y39A3A.2 protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 87  FDRTELSYFSNNLIHDNKESRDD 155
           F+ TEL + +N++IH+ K S DD
Sbjct: 100 FNTTELEWLNNDVIHNLKFSTDD 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,871,712
Number of Sequences: 27780
Number of extensions: 311283
Number of successful extensions: 981
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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