Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B18
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    27   0.12 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   4.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.0  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 399 SGGCSESNIFCVSLWALTIHVLSMQASISSVCQISI 506
           SG  S   I C  LW ++  VLS  ASI ++C IS+
Sbjct: 104 SGNWSFGTIMC-DLW-VSFDVLSCTASILNLCMISV 137


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 399 SGGCSESNIFCVSLWALTIHVLSMQASISSVCQISI 506
           +GG  E        W +++ +L   ASI S+C ISI
Sbjct: 100 TGGTWELGPMLCDSW-VSLDILLCTASILSLCAISI 134


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 592 YLPDELPNDTLELAKMAIHRITSVDPTMKIEI 497
           Y+P ELPND   L +  +    + D    I++
Sbjct: 153 YIPPELPNDEKSLFENGVEIGINFDKYDNIQV 184


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 500 FNFHSRINGSYPMNS 544
           FNFH  IN   PM +
Sbjct: 500 FNFHITINADKPMKA 514


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 500 FNFHSRINGSYPMNS 544
           FNFH  IN   PM +
Sbjct: 500 FNFHITINADKPMKA 514


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 640 WRMLYWMPKFKNL 602
           WR +Y M +F+NL
Sbjct: 384 WRQIYNMVRFRNL 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,059
Number of Sequences: 438
Number of extensions: 4080
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)