Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B17
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127649-1|AAI27650.1|  140|Homo sapiens transmembrane protein 1...    30   5.1  
BC070231-1|AAH70231.1|  139|Homo sapiens TMEM107 protein protein.      30   5.1  
AY358525-1|AAQ88889.1|  140|Homo sapiens GRVS638 protein.              30   5.1  
AY517502-1|AAR98781.1|  143|Homo sapiens hypothetical protein pr...    29   8.9  

>BC127649-1|AAI27650.1|  140|Homo sapiens transmembrane protein 107
           protein.
          Length = 140

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 317 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 415
           S  LGL+ VE A FLSG ++ +  +  ++IG H
Sbjct: 58  SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 90


>BC070231-1|AAH70231.1|  139|Homo sapiens TMEM107 protein protein.
          Length = 139

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 317 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 415
           S  LGL+ VE A FLSG ++ +  +  ++IG H
Sbjct: 64  SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 96


>AY358525-1|AAQ88889.1|  140|Homo sapiens GRVS638 protein.
          Length = 140

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 317 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 415
           S  LGL+ VE A FLSG ++ +  +  ++IG H
Sbjct: 58  SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 90


>AY517502-1|AAR98781.1|  143|Homo sapiens hypothetical protein
           protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = -1

Query: 421 SNVEPDGYSFAYETSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKHYTVTFTAGP 242
           ++V P   +   ET +GT+  +    +  +S   ++  TG  A  A DG  YTV  ++GP
Sbjct: 9   TSVVPRPTTAPQETRNGTA--DAASKEGRKSSLPSVAPTGS-ASAAEDGA-YTVRPSSGP 64

Query: 241 NGFQPXT 221
           +G QP T
Sbjct: 65  HGSQPFT 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,453,045
Number of Sequences: 237096
Number of extensions: 1724942
Number of successful extensions: 4388
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4388
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)