Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B16
(583 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001845-1|AAH01845.1| 421|Homo sapiens chromosome 7 open readi... 116 6e-26
BC000769-1|AAH00769.1| 421|Homo sapiens chromosome 7 open readi... 116 6e-26
AK024820-1|BAB15019.1| 421|Homo sapiens protein ( Homo sapiens ... 116 6e-26
BC111054-1|AAI11055.1| 725|Homo sapiens FGD3 protein protein. 32 1.7
BC032429-1|AAH32429.1| 725|Homo sapiens FGD3 protein protein. 32 1.7
AY211386-1|AAP20645.1| 634|Homo sapiens FGD3 protein. 32 1.7
AL451065-1|CAI95107.1| 725|Homo sapiens FYVE, RhoGEF and PH dom... 32 1.7
AL389924-2|CAI41118.1| 725|Homo sapiens FYVE, RhoGEF and PH dom... 32 1.7
AK000004-1|BAA92229.1| 698|Homo sapiens FLJ00004 protein protein. 32 1.7
AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. 31 3.9
AC005390-2|AAC28919.1| 1384|Homo sapiens R31180_1 protein. 31 3.9
AB023180-1|BAA76807.2| 1391|Homo sapiens KIAA0963 protein protein. 31 3.9
>BC001845-1|AAH01845.1| 421|Homo sapiens chromosome 7 open reading
frame 25 protein.
Length = 421
Score = 116 bits (279), Expect = 6e-26
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = -3
Query: 581 FIFXQEVLTQQCSWEAERPVKPILRKLFEGKKLVCCETAWNDFEKILETLGGPMEKKRTV 402
FIF ++VLT+Q E + V P L + K+L CE+A DF+ IL+TLGGP E++R
Sbjct: 269 FIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERAT 328
Query: 401 LLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEGFVRAAL 222
+L + I V PD + L + RS IF G +KA+T++AN GFVRAA
Sbjct: 329 VLIKRINVVPD----QPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAAN 384
Query: 221 QQGVTYAAFVHESRALTEGKE 159
QGV ++ F+H+ RALTE KE
Sbjct: 385 NQGVKFSVFIHQPRALTESKE 405
>BC000769-1|AAH00769.1| 421|Homo sapiens chromosome 7 open reading
frame 25 protein.
Length = 421
Score = 116 bits (279), Expect = 6e-26
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = -3
Query: 581 FIFXQEVLTQQCSWEAERPVKPILRKLFEGKKLVCCETAWNDFEKILETLGGPMEKKRTV 402
FIF ++VLT+Q E + V P L + K+L CE+A DF+ IL+TLGGP E++R
Sbjct: 269 FIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERAT 328
Query: 401 LLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEGFVRAAL 222
+L + I V PD + L + RS IF G +KA+T++AN GFVRAA
Sbjct: 329 VLIKRINVVPD----QPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAAN 384
Query: 221 QQGVTYAAFVHESRALTEGKE 159
QGV ++ F+H+ RALTE KE
Sbjct: 385 NQGVKFSVFIHQPRALTESKE 405
>AK024820-1|BAB15019.1| 421|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21167 fis, clone CAS10861. ).
Length = 421
Score = 116 bits (279), Expect = 6e-26
Identities = 61/141 (43%), Positives = 84/141 (59%)
Frame = -3
Query: 581 FIFXQEVLTQQCSWEAERPVKPILRKLFEGKKLVCCETAWNDFEKILETLGGPMEKKRTV 402
FIF ++VLT+Q E + V P L + K+L CE+A DF+ IL+TLGGP E++R
Sbjct: 269 FIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERAT 328
Query: 401 LLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEGFVRAAL 222
+L + I V PD + L + RS IF G +KA+T++AN GFVRAA
Sbjct: 329 VLIKRINVVPD----QPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAAN 384
Query: 221 QQGVTYAAFVHESRALTEGKE 159
QGV ++ F+H+ RALTE KE
Sbjct: 385 NQGVKFSVFIHQPRALTESKE 405
>BC111054-1|AAI11055.1| 725|Homo sapiens FGD3 protein protein.
Length = 725
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 279 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 148
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>BC032429-1|AAH32429.1| 725|Homo sapiens FGD3 protein protein.
Length = 725
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 279 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 148
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AY211386-1|AAP20645.1| 634|Homo sapiens FGD3 protein.
Length = 634
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 279 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 148
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AL451065-1|CAI95107.1| 725|Homo sapiens FYVE, RhoGEF and PH domain
containing 3 protein.
Length = 725
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 279 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 148
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AL389924-2|CAI41118.1| 725|Homo sapiens FYVE, RhoGEF and PH domain
containing 3 protein.
Length = 725
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 279 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 148
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 540 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 581
>AK000004-1|BAA92229.1| 698|Homo sapiens FLJ00004 protein protein.
Length = 698
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 279 SSNQSAYSLGKRRLRQGCSSTGRNICGFCSRVKSSH*REGRLCK 148
S ++ S+ KRR C G ICG CS K+ + R+ R+C+
Sbjct: 604 SCGETFNSITKRR--HHCKLCGAVICGKCSEFKAENSRQSRVCR 645
>AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein.
Length = 1269
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -3
Query: 461 NDFEKILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNF 282
N +++++ LGGP K + PD + Q L + HV +R K F
Sbjct: 631 NTLDELIDQLGGPQRVAEMTGRKGRVVSRPDGTVAFESRAEQGLSI-DHVNLREKQRFMS 689
Query: 281 GHRIKALTVSANEGFV 234
G ++ A+ A+ V
Sbjct: 690 GEKLVAIISEASSSGV 705
>AC005390-2|AAC28919.1| 1384|Homo sapiens R31180_1 protein.
Length = 1384
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -3
Query: 461 NDFEKILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNF 282
N +++++ LGGP K + PD + Q L + HV +R K F
Sbjct: 739 NTLDELIDQLGGPQRVAEMTGRKGRVVSRPDGTVAFESRAEQGLSI-DHVNLREKQRFMS 797
Query: 281 GHRIKALTVSANEGFV 234
G ++ A+ A+ V
Sbjct: 798 GEKLVAIISEASSSGV 813
>AB023180-1|BAA76807.2| 1391|Homo sapiens KIAA0963 protein protein.
Length = 1391
Score = 30.7 bits (66), Expect = 3.9
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -3
Query: 461 NDFEKILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNF 282
N +++++ LGGP K + PD + Q L + HV +R K F
Sbjct: 757 NTLDELIDQLGGPQRVAEMTGRKGRVVSRPDGTVAFESRAEQGLSI-DHVNLREKQRFMS 815
Query: 281 GHRIKALTVSANEGFV 234
G ++ A+ A+ V
Sbjct: 816 GEKLVAIISEASSSGV 831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,282,813
Number of Sequences: 237096
Number of extensions: 1222331
Number of successful extensions: 2577
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2574
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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