Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B16
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41278-2|AAK31509.1|  403|Caenorhabditis elegans Hypothetical pr...    60   1e-09
U41034-8|AAA82382.1|  669|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z70267-3|CAA94214.1|  534|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical...    27   7.4  
AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical...    27   7.4  
AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical ...    27   7.4  
AF031837-1|AAC13673.1|  624|Caenorhabditis elegans GLY5c protein.      27   7.4  
AF031836-1|AAC13672.1|  626|Caenorhabditis elegans GLY5b protein.      27   7.4  
AF031835-1|AAC13671.1|  623|Caenorhabditis elegans GLY5a protein.      27   7.4  
AF040657-4|AAB95053.1|  261|Caenorhabditis elegans Hypothetical ...    27   9.7  
AC024090-2|AAK67219.1|  658|Caenorhabditis elegans Hypothetical ...    27   9.7  

>U41278-2|AAK31509.1|  403|Caenorhabditis elegans Hypothetical
           protein F33G12.3 protein.
          Length = 403

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 39/145 (26%), Positives = 70/145 (48%)
 Frame = -3

Query: 575 FXQEVLTQQCSWEAERPVKPILRKLFEGKKLVCCETAWNDFEKILETLGGPMEKKRTVLL 396
           F +E++ +    E  +P K  + +  +G  L+ CE A+    +I++ +GGP EKKR   L
Sbjct: 260 FKEEMINKHVECERLKPAKAEVLEKLKGHHLIMCELAYRRVAEIVKNVGGPTEKKRFEEL 319

Query: 395 KEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEGFVRAALQQ 216
            + I    D    E     +   ++G   + +K +F+     K  TV+AN+ F+  +  +
Sbjct: 320 SKTIERVQDQPSDEIGRVVKLRNIKGITSI-TKRVFSCAEVTKTTTVTANQKFLTHSRAK 378

Query: 215 GVTYAAFVHESRALTEGKEDSARRI 141
            + +       R LTE KE +A+ I
Sbjct: 379 HIYFDVIEIPPRPLTEQKEATAKVI 403


>U41034-8|AAA82382.1|  669|Caenorhabditis elegans Hypothetical
           protein M02D8.5 protein.
          Length = 669

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +1

Query: 448 FSKSFHAVSQQTSFLPSNNFLSIGFTGLSASQEH 549
           +S  F   SQQ SFL  ++ + IG TGL+AS EH
Sbjct: 252 YSNLFFTKSQQVSFLFQSDGI-IGGTGLNASLEH 284


>Z70267-3|CAA94214.1|  534|Caenorhabditis elegans Hypothetical
           protein K04C1.2b protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 287 NFGHRIKALTVSANEGFVRAALQQGVTYAAFVHESRALTEGKEDSARRIT 138
           NFG  I A  VS   G   ++ Q   + A  VH +  + +G  D + R T
Sbjct: 29  NFGKPIFATFVSKGTGNPGSSDQPSTSSAGNVHRNSTINQGANDGSERNT 78


>AL110487-11|CAC42369.1|  624|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12c protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = -3

Query: 446 ILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIK 267
           +L T+   +E+    LL+E++ V  DDF  + D+ ++ L+         + +  FG ++K
Sbjct: 191 LLRTVHSVLERTPDHLLEEVVLV--DDFS-DMDHTKRPLE---------EYMSQFGGKVK 238

Query: 266 ALTVSANEGFVRAALQ 219
            L +   EG +RA L+
Sbjct: 239 ILRMEKREGLIRARLR 254


>AL110487-10|CAC42368.1|  623|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12b protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = -3

Query: 446 ILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIK 267
           +L T+   +E+    LL+E++ V  DDF  + D+ ++ L+         + +  FG ++K
Sbjct: 191 LLRTVHSVLERTPDHLLEEVVLV--DDFS-DMDHTKRPLE---------EYMSQFGGKVK 238

Query: 266 ALTVSANEGFVRAALQ 219
            L +   EG +RA L+
Sbjct: 239 ILRMEKREGLIRARLR 254


>AL110487-9|CAB54435.1|  626|Caenorhabditis elegans Hypothetical
           protein Y39E4B.12a protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = -3

Query: 446 ILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIK 267
           +L T+   +E+    LL+E++ V  DDF  + D+ ++ L+         + +  FG ++K
Sbjct: 191 LLRTVHSVLERTPDHLLEEVVLV--DDFS-DMDHTKRPLE---------EYMSQFGGKVK 238

Query: 266 ALTVSANEGFVRAALQ 219
            L +   EG +RA L+
Sbjct: 239 ILRMEKREGLIRARLR 254


>AF031837-1|AAC13673.1|  624|Caenorhabditis elegans GLY5c protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = -3

Query: 446 ILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIK 267
           +L T+   +E+    LL+E++ V  DDF  + D+ ++ L+         + +  FG ++K
Sbjct: 191 LLRTVHSVLERTPDHLLEEVVLV--DDFS-DMDHTKRPLE---------EYMSQFGGKVK 238

Query: 266 ALTVSANEGFVRAALQ 219
            L +   EG +RA L+
Sbjct: 239 ILRMEKREGLIRARLR 254


>AF031836-1|AAC13672.1|  626|Caenorhabditis elegans GLY5b protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = -3

Query: 446 ILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIK 267
           +L T+   +E+    LL+E++ V  DDF  + D+ ++ L+         + +  FG ++K
Sbjct: 191 LLRTVHSVLERTPDHLLEEVVLV--DDFS-DMDHTKRPLE---------EYMSQFGGKVK 238

Query: 266 ALTVSANEGFVRAALQ 219
            L +   EG +RA L+
Sbjct: 239 ILRMEKREGLIRARLR 254


>AF031835-1|AAC13671.1|  623|Caenorhabditis elegans GLY5a protein.
          Length = 623

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/76 (27%), Positives = 40/76 (52%)
 Frame = -3

Query: 446 ILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIK 267
           +L T+   +E+    LL+E++ V  DDF  + D+ ++ L+         + +  FG ++K
Sbjct: 191 LLRTVHSVLERTPDHLLEEVVLV--DDFS-DMDHTKRPLE---------EYMSQFGGKVK 238

Query: 266 ALTVSANEGFVRAALQ 219
            L +   EG +RA L+
Sbjct: 239 ILRMEKREGLIRARLR 254


>AF040657-4|AAB95053.1|  261|Caenorhabditis elegans Hypothetical
           protein T20H9.4 protein.
          Length = 261

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +1

Query: 418 SIGPPNVSSIFSKSFHAVSQ-QTSFLPSNNFLSIGFTGLSASQEHCCVKTS 567
           SI P     +F   +   +  +  +L  NN   I +   S    HCC++ S
Sbjct: 211 SIDPDEFLKVFKPEYDGGNNHRVEYLSDNNIFVISYGTTSRPWVHCCIERS 261


>AC024090-2|AAK67219.1|  658|Caenorhabditis elegans Hypothetical
           protein C52E2.4 protein.
          Length = 658

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +1

Query: 10  HFLS-FQPHLXLFNFLITVHLSQXICFKHTKI*LHIINTLKYHKVILLAESSF 165
           +FLS  QPH+       T  LS   CF++  I  HI++ L ++++++L + S+
Sbjct: 301 YFLSKMQPHIDSRTESSTSWLS---CFRNPVIMEHIVHGLDFYELVVLRKVSY 350


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,549,881
Number of Sequences: 27780
Number of extensions: 223808
Number of successful extensions: 818
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)