Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B11
(306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 118 3e-27
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 118 3e-27
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 118 3e-27
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 118 3e-27
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 118 3e-27
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 118 3e-27
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 116 2e-26
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 98 5e-21
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 73 1e-13
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 73 1e-13
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 69 2e-12
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 69 2e-12
AK126699-1|BAC86647.1| 144|Homo sapiens protein ( Homo sapiens ... 29 2.0
Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein. 28 4.6
U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein. 28 4.6
BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3 (Drosoph... 28 4.6
BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homo... 28 4.6
AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein. 28 4.6
AL122074-1|CAB59249.1| 333|Homo sapiens hypothetical protein pr... 28 4.6
AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Ta... 28 4.6
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo... 28 4.6
AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein. 28 4.6
AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein. 28 4.6
AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein. 28 4.6
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 118 bits (284), Expect = 3e-27
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAKN 11
RMGE DD +R K DG ++KN
Sbjct: 61 RMGESDDSILRLAKADGIVSKN 82
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 118 bits (284), Expect = 3e-27
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAKN 11
RMGE DD +R K DG ++KN
Sbjct: 61 RMGESDDSILRLAKADGIVSKN 82
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 118 bits (284), Expect = 3e-27
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAKN 11
RMGE DD +R K DG ++KN
Sbjct: 61 RMGESDDSILRLAKADGIVSKN 82
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 118 bits (284), Expect = 3e-27
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAKN 11
RMGE DD +R K DG ++KN
Sbjct: 61 RMGESDDSILRLAKADGIVSKN 82
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 118 bits (284), Expect = 3e-27
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAKN 11
RMGE DD +R K DG ++KN
Sbjct: 61 RMGESDDSILRLAKADGIVSKN 82
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 118 bits (284), Expect = 3e-27
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAKN 11
RMGE DD +R K DG ++KN
Sbjct: 61 RMGESDDSILRLAKADGIVSKN 82
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 116 bits (278), Expect = 2e-26
Identities = 53/81 (65%), Positives = 62/81 (76%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RMGEXDDCSVRXTKKDGRLAK 14
RMGE DD +R K DG ++K
Sbjct: 61 RMGESDDSILRLAKADGIVSK 81
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 97.9 bits (233), Expect = 5e-21
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIR 77
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 76 RM 71
RM
Sbjct: 61 RM 62
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 122
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 122
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = -3
Query: 256 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCG 86
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A + + + K+ + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVARLTRSQAGLMASLKLMLSAG 57
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = -3
Query: 196 NRLIHAKDHASVQLVIADVDPATGRAADTXKMYVVCGAIRRMGEXDDCSVRXTK 35
NR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIRRMGE DD +R K
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>AK126699-1|BAC86647.1| 144|Homo sapiens protein ( Homo sapiens
cDNA FLJ44745 fis, clone BRACE3028360. ).
Length = 144
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 9 SFFA--SLPSFFVXLTLQSSXSPILRIAPQTTYILXVSAARP-VAGSTSAITSCTEAW 173
SFF SLPSFFV L++ S SP L +P VS P + S + CT AW
Sbjct: 46 SFFPPLSLPSFFVFLSILPSFSPPLPSSPLPD---GVSLLLPGLECSEPRMHHCTPAW 100
>Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 294 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 181
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 294 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 181
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3
(Drosophila) protein.
Length = 1523
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 289 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 155
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526
>BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homolog
(S. cerevisiae) protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 294 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 181
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein.
Length = 1523
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 289 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 155
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526
>AL122074-1|CAB59249.1| 333|Homo sapiens hypothetical protein
protein.
Length = 333
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 289 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 155
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 157 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 201
>AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor
Tat-CT1 protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 294 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 181
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
variant protein.
Length = 1116
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 294 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 181
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 756 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 793
>AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein.
Length = 1523
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 289 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 155
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526
>AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein.
Length = 1559
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 289 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 155
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 518 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 562
>AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.
Length = 1087
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 294 SVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 181
+ S RV++H C+T V+ T G+ RP +ST
Sbjct: 727 ATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,356,513
Number of Sequences: 237096
Number of extensions: 813727
Number of successful extensions: 1799
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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