Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B10
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   3.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   3.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   3.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.7  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -3

Query: 252 NFWVAARKRKPDTWIV*KLMVWNE-ERSSALICSAITMNAQLLPN--NLRDFW 103
           N  ++ R++ PD  I+  +  WNE     + +  +  + A ++ +  N  D W
Sbjct: 81  NHLMSLREKNPDLKIILSMGGWNEGSYKYSTVAKSAALRATMVQSVLNFTDVW 133


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 RSWWEIMPPVTSVNGERKNGDK 311
           R WWE   PV+ +   R +GD+
Sbjct: 72  RPWWERYQPVSYILNTR-SGDE 92


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 RSWWEIMPPVTSVNGERKNGDK 311
           R WWE   PV+ +   R +GD+
Sbjct: 73  RPWWERYQPVSYILNTR-SGDE 93


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 RSWWEIMPPVTSVNGERKNGDK 311
           R WWE   PV+ +   R +GD+
Sbjct: 73  RPWWERYQPVSYILNTR-SGDE 93


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 344 RFWVKLRKHHVFVAVLSLTVYGCYWWHDF 258
           R W +L K+    A +  T   CY+++ F
Sbjct: 92  RTWTRLLKNLESCAKIKKTKRYCYYYYAF 120


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -2

Query: 211 DCLEAYGLERGKVKCAHLFGDYH 143
           +CL       G + C  L  DYH
Sbjct: 301 ECLSNPCSNAGTLDCVQLVNDYH 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,447
Number of Sequences: 336
Number of extensions: 2037
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)