Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B10
         (410 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024811-2|AAF60773.1|  121|Caenorhabditis elegans Hypothetical ...    59   1e-09
Z73906-7|CAA98119.2|  428|Caenorhabditis elegans Hypothetical pr...    28   3.0  
Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical pr...    27   5.3  
AC025716-10|AAK39607.1|  474|Caenorhabditis elegans Hypothetical...    27   7.0  
Z82286-5|CAB05311.1|  130|Caenorhabditis elegans Hypothetical pr...    26   9.2  
Z74031-8|CAA98451.1|  372|Caenorhabditis elegans Hypothetical pr...    26   9.2  
U28971-8|AAD31046.2|  767|Caenorhabditis elegans Related to isle...    26   9.2  
AJ245560-1|CAB52188.1|  767|Caenorhabditis elegans IDA-1 protein...    26   9.2  
AF126740-1|AAK14908.1|  767|Caenorhabditis elegans IA2 protein.        26   9.2  

>AC024811-2|AAF60773.1|  121|Caenorhabditis elegans Hypothetical
           protein Y54E10BL.5 protein.
          Length = 121

 Score = 58.8 bits (136), Expect = 1e-09
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -2

Query: 325 ENIMSLSPFFRSPFTDVTGGMISHQLLGR-CQKEEARYMDCLEAYGLERGKVKCAHLFGD 149
           EN  SLSP  ++P TD     +S Q  GR C   E+++  C+EAYG + G+  C     D
Sbjct: 9   ENFTSLSPIVKAPITDTLSVPLSQQ--GRICGFFESQFYRCMEAYGAKMGRKYCDLEHRD 66

Query: 148 YHECSTLTKQLKRFLAIRHER 86
           + EC T  KQ KR  AIR +R
Sbjct: 67  FQECVTGDKQKKRADAIREQR 87


>Z73906-7|CAA98119.2|  428|Caenorhabditis elegans Hypothetical
           protein D2030.7 protein.
          Length = 428

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +3

Query: 270 PVTSVNGERKNGDKDMMFSELNPKS*KYSKTLNLIYKF*SSAGRIHL 410
           PV ++  ++ N D D+MF E+ P+  ++  T  +  +  ++   +HL
Sbjct: 183 PVRTMEVQQDNDDDDVMFIEIRPRIHEFPSTREIKQEENTTEDTVHL 229


>Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical
           protein F20D1.2 protein.
          Length = 641

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 250 LLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDY---HEC 137
           +LG    EE  YM+ L A  +++GK+  + + G Y   H+C
Sbjct: 378 ILGYGSDEEDNYMNMLIAMFIQKGKLHVSFVQGGYKKLHDC 418


>AC025716-10|AAK39607.1|  474|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.7 protein.
          Length = 474

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 154 GDYHECSTLTKQLKRFLAIRHERQRQISXRKTYRRRKVCE 35
           G+Y + S  TK  +    +   R+R+   RK +RRR+V +
Sbjct: 427 GEYSDDSDDTKNERLRQKLERHRKRENRLRKLFRRREVLD 466


>Z82286-5|CAB05311.1|  130|Caenorhabditis elegans Hypothetical
           protein W02A2.8 protein.
          Length = 130

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 234 WQRPRSWWEIMPPVTSVNGER 296
           W+RP S W  +  VT+V+ E+
Sbjct: 6   WKRPHSTWNKITAVTNVSSEK 26


>Z74031-8|CAA98451.1|  372|Caenorhabditis elegans Hypothetical
           protein F32D8.8 protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 332 KLRKHHVFVAVLSLTVYGCY-WWHDFPPTSG 243
           +LR + +   +   TV+  +  W+DFPPT+G
Sbjct: 3   RLRSNPLLYLLSVATVFYLFAMWYDFPPTNG 33


>U28971-8|AAD31046.2|  767|Caenorhabditis elegans Related to islet
           cell diabetesautoantigen protein 1 protein.
          Length = 767

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 341 FWVKLRKHHVFVAVLSLTVYGCYWWHDFPPTSGSLPERGSQIHGLSRSLW 192
           FW  + +H V + V   T   C    ++ P +GS      +IH +S  +W
Sbjct: 583 FWQTIWQHGVCLVVNLSTPEECKQEKNYWPDTGSEVHGAFEIHLVSEHIW 632


>AJ245560-1|CAB52188.1|  767|Caenorhabditis elegans IDA-1 protein
           protein.
          Length = 767

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 341 FWVKLRKHHVFVAVLSLTVYGCYWWHDFPPTSGSLPERGSQIHGLSRSLW 192
           FW  + +H V + V   T   C    ++ P +GS      +IH +S  +W
Sbjct: 583 FWQTIWQHGVCLVVNLSTPEECKQEKNYWPDTGSEVHGAFEIHLVSEHIW 632


>AF126740-1|AAK14908.1|  767|Caenorhabditis elegans IA2 protein.
          Length = 767

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 341 FWVKLRKHHVFVAVLSLTVYGCYWWHDFPPTSGSLPERGSQIHGLSRSLW 192
           FW  + +H V + V   T   C    ++ P +GS      +IH +S  +W
Sbjct: 583 FWQTIWQHGVCLVVNLSTPEECKQEKNYWPDTGSEVHGAFEIHLVSEHIW 632


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,578,129
Number of Sequences: 27780
Number of extensions: 192038
Number of successful extensions: 438
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)