Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B10
(410 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 24 0.77
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 23 1.0
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 23 1.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 1.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 1.4
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 1.4
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 3.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 4.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 5.4
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 20 9.5
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 20 9.5
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.8 bits (49), Expect = 0.77
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 347 LRFWVKLRKHHVFVAVLSL 291
L W+++ KHH F+ V S+
Sbjct: 119 LSCWLQMTKHHNFIKVCSV 137
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 23.4 bits (48), Expect = 1.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 81 DKFLQGKLTGDEKYV 37
D FL+ +TGDEK+V
Sbjct: 22 DPFLKRPITGDEKWV 36
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 81 DKFLQGKLTGDEKYV 37
D FL+ +TGDEK+V
Sbjct: 22 DPFLKRLITGDEKWV 36
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 1.4
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 261 FPTNFWVAARKRKPDTWIV*KLMVWNEERS-SALICSAITMNAQLLPNNLRDFW 103
FP+N WVA + + W+ + W ++ S ++C + P +L D W
Sbjct: 306 FPSNSWVAINELQDSFWL--EQYSWALFKAMSHMLCIGY---GRFPPQSLTDMW 354
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 1.4
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 261 FPTNFWVAARKRKPDTWIV*KLMVWNEERS-SALICSAITMNAQLLPNNLRDFW 103
FP+N WVA + + W+ + W ++ S ++C + P +L D W
Sbjct: 274 FPSNSWVAINELQDSFWL--EQYSWALFKAMSHMLCIGY---GRFPPQSLTDMW 322
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 81 DKFLQGKLTGDEKYV 37
D FL+ +TGDEK+V
Sbjct: 143 DPFLKRLITGDEKWV 157
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 3.1
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 234 WQRPRSWWEIMPPVTSVNG 290
W+ R+ ++I+P + S NG
Sbjct: 221 WKSARTRFDILPLILSANG 239
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 4.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 302 VLSLTVYGCYWWHDFPPTSGSLPERGSQI 216
+LSLTV+ PPTS ++P G +
Sbjct: 288 LLSLTVFFLLLAEIIPPTSLAIPLLGKYL 316
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 302 VLSLTVYGCYWWHDFPPTSGSLPERGSQI 216
+LSLTV+ PPTS ++P G +
Sbjct: 275 LLSLTVFFLLLAEIIPPTSLTVPLLGKYL 303
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 20.2 bits (40), Expect = 9.5
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = -1
Query: 314 VFVAVLSLTVYGCYWWHDFPPTSGSL 237
V++ LSL++ + W + P +G++
Sbjct: 22 VWIYALSLSLPPLFGWGSYGPEAGNV 47
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.2 bits (40), Expect = 9.5
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = +2
Query: 32 GLTYFSSPVSFPXRNLSLPLVSYCQKSLKLFG 127
G +YF + +++LPL + Q +++ +G
Sbjct: 663 GTSYFLNDYKHKDVDVTLPLDLHIQNAIREYG 694
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,386
Number of Sequences: 438
Number of extensions: 2330
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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