Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B10
         (410 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g72850.1 68414.m08426 disease resistance protein (TIR-NBS cla...    30   0.70 
At5g53690.1 68418.m06670 hypothetical protein                          29   0.92 
At3g52900.1 68416.m05830 expressed protein contains Pfam profile...    29   1.6  
At5g09840.1 68418.m01138 expressed protein contains Pfam profile...    28   2.8  
At5g17700.1 68418.m02074 MATE efflux family protein similar to r...    27   4.9  
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative...    27   6.5  
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative...    27   6.5  
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative...    27   6.5  

>At1g72850.1 68414.m08426 disease resistance protein (TIR-NBS
           class), putative domain signature TIR-NBS exists,
           suggestive of a disease resistance protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 0.70
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +2

Query: 179 SSFQTISF*TIHVSGFLFLAATQKLVGNHATSNIRKR*AKERRQ 310
           +SF+++S   +H+SGFL L  T K++G+       +R  KE +Q
Sbjct: 342 TSFESLSLRAVHISGFLPL--TLKILGSSLRGKDEERWEKELQQ 383


>At5g53690.1 68418.m06670 hypothetical protein
          Length = 76

 Score = 29.5 bits (63), Expect = 0.92
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 259 SHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHEC 137
           +H L+  C +EE R  +  + + L  GKV C      Y EC
Sbjct: 29  THDLISHCVQEEERLTNEKKEHDLVAGKVICDKKRKQYDEC 69


>At3g52900.1 68416.m05830 expressed protein contains Pfam profile
           PF04949: Family of unknown function (DUF662)
          Length = 164

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 238 CQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLK 113
           CQK+E  Y D LEA+  E+ K K AHL     E    +++L+
Sbjct: 110 CQKKEKEYKDTLEAFN-EKNKEK-AHLVSMLMELLAESERLR 149


>At5g09840.1 68418.m01138 expressed protein contains Pfam profile
           PF04396: Protein of unknown function, DUF537
          Length = 924

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 261 IMPPVTSVNGERKNGDKDMMFSELNPKS 344
           I P   S N + K  D D+ F+EL P S
Sbjct: 802 IFPSTPSPNAKSKEDDSDLAFAELGPVS 829


>At5g17700.1 68418.m02074 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile PF01554:
           Uncharacterized membrane protein family
          Length = 497

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 204 RQSMYLASSFWQRPRSWWEIMPPVT 278
           R+S+YL    W   R  W I  P T
Sbjct: 22  RESLYLRKKIWSEVRKMWRIALPST 46


>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
           similar to cation-chloride co-transporter GB:AAC49874
           GI:2582381 from [Nicotiana tabacum], Cation-Chloride
           Cotransporter (CCC) Family Member, PMID:11500563
          Length = 975

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 238 CQKEEARYMDCLEAYGLERG-KVKCAHLFGDYHECSTLTKQLKRFLAIRHERQR 80
           C  + A + +C++  G  RG  +  + L GDY+EC+   K+  + LA   E +R
Sbjct: 645 CHPKLADFANCMKKKG--RGMSIFVSILDGDYYECAEEAKEACKQLATYIEYKR 696


>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
           similar to cation-chloride co-transporter GB:AAC49874
           GI:2582381 from [Nicotiana tabacum], Cation-Chloride
           Cotransporter (CCC) Family Member, PMID:11500563
          Length = 975

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 238 CQKEEARYMDCLEAYGLERG-KVKCAHLFGDYHECSTLTKQLKRFLAIRHERQR 80
           C  + A + +C++  G  RG  +  + L GDY+EC+   K+  + LA   E +R
Sbjct: 645 CHPKLADFANCMKKKG--RGMSIFVSILDGDYYECAEEAKEACKQLATYIEYKR 696


>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
           similar to cation-chloride co-transporter GB:AAC49874
           GI:2582381 from [Nicotiana tabacum], Cation-Chloride
           Cotransporter (CCC) Family Member, PMID:11500563
          Length = 975

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 238 CQKEEARYMDCLEAYGLERG-KVKCAHLFGDYHECSTLTKQLKRFLAIRHERQR 80
           C  + A + +C++  G  RG  +  + L GDY+EC+   K+  + LA   E +R
Sbjct: 645 CHPKLADFANCMKKKG--RGMSIFVSILDGDYYECAEEAKEACKQLATYIEYKR 696


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,186,049
Number of Sequences: 28952
Number of extensions: 186145
Number of successful extensions: 451
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)