Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B08
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 78 1e-14
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 78 1e-14
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 62 6e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 59 5e-09
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 58 1e-08
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 56 7e-08
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 56 7e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 55 9e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 55 1e-07
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 52 6e-07
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 52 8e-07
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 45 1e-04
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 39 0.008
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 37 0.025
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 37 0.025
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 37 0.025
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 37 0.033
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 37 0.033
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 37 0.033
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 37 0.033
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 36 0.044
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 36 0.058
BT010287-1|AAQ23605.1| 831|Drosophila melanogaster LD40663p pro... 30 3.8
AE013599-2854|AAF57580.2| 831|Drosophila melanogaster CG7417-PA... 30 3.8
AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA... 29 6.7
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 78.2 bits (184), Expect = 1e-14
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 50 YSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQ 229
Y L + +GGV LL+ S + + ++ + S Y+ P+
Sbjct: 51 YKLLTNIATNRFGGVRLLVHKSIQHTVLNITIDIEAIAINIESKLKLNIFSTYIS-PTKN 109
Query: 230 IFNE-IKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPT 406
I N+ + N ++ P +I GDFN H WGS +N G +D L +LN SPT
Sbjct: 110 ITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPT 169
Query: 407 RLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS-FP 544
+ + IDL++C+P LA W L + SDH+PII + FP
Sbjct: 170 HFS-THNTYTHIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFP 215
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 78.2 bits (184), Expect = 1e-14
Identities = 45/149 (30%), Positives = 78/149 (52%)
Frame = +2
Query: 89 GVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLP 268
G+ +LI+ + + + S C ++ I V+ Y+P + ++I ++ L
Sbjct: 68 GIGVLIKRNVPHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLN 127
Query: 269 RPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 448
++LGD NS WGS +N+ G ++ ++ SL +LN GSPT L+ + ID+
Sbjct: 128 GSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLS-THNTFTHIDI 186
Query: 449 SICTPQLASSLSWSTLCSTYNSDHYPIII 535
S+ +PQ+A SWS + + SDH+PI I
Sbjct: 187 SLISPQIAHMCSWSISDNLHGSDHFPITI 215
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 62.5 bits (145), Expect = 6e-10
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Frame = +2
Query: 2 LSETWLKPDFVFKIPGYSCLREDRADGYGG-VCLLIRNSSTFSSFP-LPSH--SNC-FSV 166
++ETWL F IP Y+ R DR + GG V + + N+ P + SH N +
Sbjct: 43 INETWLTHSDRFNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQI 102
Query: 167 IAAIVDGICFVSIYVPHPSLQIF----------NEIKNL-------ISVLPRPFMILGDF 295
+ SIY + + N +K+L IS + F+I GDF
Sbjct: 103 NTDSNSSLKIYSIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDF 162
Query: 296 NSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLAS 475
NS H +W + +N +G L ++ D+ IL PT + A L +C + +
Sbjct: 163 NSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDLCLTNIPN 221
Query: 476 SLSWSTLCSTYNSDHYPIIISFP*N 550
L+ + +SDH P++I + N
Sbjct: 222 QLANPAVMQELSSDHLPVVIKYSTN 246
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 59.3 bits (137), Expect = 5e-09
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Frame = +2
Query: 2 LSETWLKPDFVFKIPGYSCLREDRADG--YGGVCLLIRNSSTFSSFP--LPSHSNCFSVI 169
LSET L + F+I Y + DG +GG +LIRN + +H S+
Sbjct: 35 LSETHLTSKYNFQIRDYHFYGTNHPDGKAHGGTAILIRNRMKHHFYKEFAENHLQATSIN 94
Query: 170 AAIVDG--ICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYG 343
+ D + ++Y P + + + L F+ GD+N+ HT WGS + N G
Sbjct: 95 IQLDDNTLLTLAAVYCPPRFTVLEAQFLDFFQALGPHFIAAGDYNAKHTHWGSRLVNPKG 154
Query: 344 YELLD--ILDMYSLCILNSGSPTRLTKP-GEVISAIDLSICTPQLASSLSWSTLCSTYNS 514
+L I L ++ GSPT ++ ID ++ T ++ SL + +S
Sbjct: 155 KQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLIDFAV-TKNISRSLVKAECLPDLSS 213
Query: 515 DHYPIII 535
DH P++I
Sbjct: 214 DHSPVLI 220
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 58.0 bits (134), Expect = 1e-08
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Frame = +2
Query: 2 LSETWLKPDFVFKIPGYSCLREDRA----DGYGGVCLLIRNSSTFSSFPL----PSHSNC 157
++E LK KI GY+ R + GGV + +R +T FP H
Sbjct: 35 VTELRLKRGETVKIYGYAYYPAYRPSLNNNSVGGVAVFVR--TTLRHFPQRVIETRHIQL 92
Query: 158 FSV-IAAIVDGICFVSIYVPHPSLQIFNE-IKNLISVLPRPFMILGDFNSHHTSWGSSVS 331
SV +A + + F +IY PS +I ++I + +++ GD+N+ H WG + +
Sbjct: 93 SSVKVATGLGDLQFSAIYCS-PSTRIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCN 151
Query: 332 NSYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTY 508
+ G EL + L + IL +GSPTR P S ID ++ + L+ T
Sbjct: 152 SPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAV-YHGIPDHLATITQSWDL 210
Query: 509 NSDHYPIIIS 538
+SDH P+IIS
Sbjct: 211 DSDHLPLIIS 220
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 55.6 bits (128), Expect = 7e-08
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Frame = +2
Query: 2 LSETWLKPDFVFKIPGYSCLREDRADG--YGGVCLLIRNSST---FSSFPLPSHSNCFSV 166
LSET L F IPGY + DG +GG +LIRN ++F ++ S+
Sbjct: 35 LSETHLTNKNNFHIPGYLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFD-KNYLQSTSI 93
Query: 167 IAAIVDG-ICFVSIYVPHPSLQIF-NEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSY 340
+ +G ++Y P P I ++ + L F+ GD+N+ HT WGS + +
Sbjct: 94 ALQLNNGSTTLAAVYCP-PRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPK 152
Query: 341 GYELLDILDM--YSLCILNSGSPTRL-TKPGEVISAIDLSICTPQLASSLSWSTLCSTYN 511
G +L + L L ++ G PT P ++ ID +I T + ++ + + +
Sbjct: 153 GKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDFAI-TKHVPRNMVTAEALADLS 211
Query: 512 SDHYPIIIS 538
SDH P+ ++
Sbjct: 212 SDHSPVFLN 220
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 55.6 bits (128), Expect = 7e-08
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Frame = +2
Query: 2 LSETWLKPDFVFKIPGYSCLREDRADG---YGGVCLLIRNSSTFSSFPLPSHSNCF---- 160
LSET K K+ G+ + G GG +LI+NS + FPL +
Sbjct: 35 LSETHCKGAETPKLFGFVAYTANDPSGGNAKGGAAILIKNS--LAHFPLTPIATAKVQLA 92
Query: 161 -SVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNS 337
+VI + I F ++Y P +E K+++ F++ GD+N+ H WG+ SN
Sbjct: 93 PAVIETALGPISFGAVYCPPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQ 152
Query: 338 YGYELLDILDMYSLCILNSGSPTRLTKPGEVISA-IDLSICTPQLASSLSWSTLCSTYNS 514
G L +++ + L +G PTR ID ++ L + S + +S
Sbjct: 153 RGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYIDFALTKGVLGIHANISAVVE-LSS 211
Query: 515 DHYPIIIS 538
DH P++I+
Sbjct: 212 DHLPLVIT 219
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 55.2 bits (127), Expect = 9e-08
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Frame = +2
Query: 2 LSETWLKPDFVFKIPGYSCLREDRADG--YGGVCLLIRNSST---FSSFPLPSHSNCFSV 166
LSET L F IPGY + DG +GG +LIRN ++F ++ S+
Sbjct: 35 LSETHLTNKNNFHIPGYLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFD-KNYLQSTSI 93
Query: 167 IAAIVDG-ICFVSIYVPHPSLQIF-NEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSY 340
+ +G ++Y P P I ++ + L F+ GD+N+ HT WGS +
Sbjct: 94 ALQLNNGSTTLAAVYCP-PRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPK 152
Query: 341 GYELLDILDM--YSLCILNSGSPTRL-TKPGEVISAIDLSICTPQLASSLSWSTLCSTYN 511
G +L + L L ++ G PT P ++ ID +I T + ++ + + +
Sbjct: 153 GKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDFAI-TKHVPRNMVTAEALADLS 211
Query: 512 SDHYPIIIS 538
SDH P+ ++
Sbjct: 212 SDHSPVFLN 220
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 54.8 bits (126), Expect = 1e-07
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 22/194 (11%)
Frame = +2
Query: 35 FKIPGYSCLREDRADGYGG-VCLLIRNSSTFSSFP-LPSH--SNC-FSVIAAIVDGICFV 199
F IP Y+ R DR + GG V + + N+ P + SH N + +
Sbjct: 2 FNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIY 61
Query: 200 SIYVPHPSLQIF----------NEIKNL-------ISVLPRPFMILGDFNSHHTSWGSSV 328
SIY + + N +K+L IS + F+I GDFNS H +W +
Sbjct: 62 SIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTR 121
Query: 329 SNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTY 508
+N +G L ++ D+ IL PT + A L +C + + L+ +
Sbjct: 122 ANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDLCLTNIPNQLANPAVMQEL 180
Query: 509 NSDHYPIIISFP*N 550
+SDH P++I + N
Sbjct: 181 SSDHLPVVIKYSTN 194
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 52.4 bits (120), Expect = 6e-07
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Frame = +2
Query: 173 AIVDGICFVSIYVP-HPSLQIFNE-IKNLISVLP--RPFMILGDFNSHHTSWGSSVSNSY 340
A + GI F S Y P S + F + ++ L++ RP +I GD N+ T WGS +SN+
Sbjct: 82 AKIRGIHFYSCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRISNTR 141
Query: 341 GYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSD 517
G ++D +++ L +LN G PT G S ID++ + L + +W SD
Sbjct: 142 GRAVIDAMNLLDLVLLNDGFKPTFNNDRG--TSFIDVTFVSRVLVAGSNWMVHEDITLSD 199
Query: 518 H 520
H
Sbjct: 200 H 200
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 52.0 bits (119), Expect = 8e-07
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Frame = +2
Query: 5 SETWLKPDFVFKIPGYSCLREDRADGY--GGVCLLIRNSSTFSSF-PLPSHSNCFSVI-- 169
+ET ++ +PGY G GG ++I++ S P+ ++ + +
Sbjct: 38 TETHMRVGQRIYLPGYLMYHAHHPSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHL 97
Query: 170 AAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYE 349
V + ++Y+P I ++ K++ + L F+ GD+N+ H WG+ S G
Sbjct: 98 QTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKM 157
Query: 350 LLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYP 526
L +++ +L +G PT + P SA+D I L TL +SDH P
Sbjct: 158 LQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTL-QELSSDHLP 216
Query: 527 II 532
I+
Sbjct: 217 IL 218
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = +2
Query: 5 SETWLKPDFVFKIPGYSCLREDRADGY--GGVCLLIRNSSTFSSF-PLPSHSNCFSVI-- 169
+ET ++ +PGY G GG ++I++ S P+ ++ + +
Sbjct: 38 TETHMRVGQRIYLPGYLMYHAHHPSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHL 97
Query: 170 AAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYE 349
V + ++Y+P I ++ K++ + L F+ GD+N+ H WG+ S G
Sbjct: 98 QTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKM 157
Query: 350 LLDILDMYSLCILNSGSPT 406
L +++ +L +G PT
Sbjct: 158 LQEVIAHGQYQVLATGEPT 176
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 38.7 bits (86), Expect = 0.008
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Frame = +2
Query: 38 KIPGY-SCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIV--------DGI 190
++PGY + L ++ A G I NSS P C ++ + I
Sbjct: 66 ELPGYFTYLAQNPASSKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMI 125
Query: 191 CFVSIYVPHPSLQI----FNEIKNLISVL---PRPFMILGDFNSHHTSWGSSVSNSYGYE 349
S+Y P PSL F ++ N ++ GD+N+ H WG + G
Sbjct: 126 VIASVYCP-PSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 350 LLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHY 523
L D + S+ I+ +GS T + SAID SIC +L + + +SDH
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSIC-KRLGRYEKRISSSAHLSSDHL 243
Query: 524 PIII 535
PI++
Sbjct: 244 PILL 247
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.025
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +2
Query: 227 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 403
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 404 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 535
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.025
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +2
Query: 227 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 403
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 404 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 535
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.025
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +2
Query: 227 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 403
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 404 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 535
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 36.7 bits (81), Expect = 0.033
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Frame = +2
Query: 149 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 325
+N S + I C S+ ++PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 326 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLC 499
+ G L + + S I+ +G T + SAID SIC L +
Sbjct: 165 RACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSIC-KGLGRFEKRISSG 223
Query: 500 STYNSDHYPIII 535
+ +SDH PI++
Sbjct: 224 ADLSSDHLPILL 235
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.033
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +2
Query: 149 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 325
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 326 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWST 493
+ G L + + + I+ +G T + SAID SIC +L +S S
Sbjct: 165 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS- 223
Query: 494 LCSTYNSDHYPIIISFP*NTCYCHMAK 574
+ +SDH PI++ +T + K
Sbjct: 224 --ADLSSDHLPILLEINLDTSTLFLQK 248
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.033
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +2
Query: 149 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 325
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 68 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 126
Query: 326 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWST 493
+ G L + + + I+ +G T + SAID SIC +L +S S
Sbjct: 127 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS- 185
Query: 494 LCSTYNSDHYPIIISFP*NTCYCHMAK 574
+ +SDH PI++ +T + K
Sbjct: 186 --ADLSSDHLPILLEINLDTSNLFLQK 210
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 36.7 bits (81), Expect = 0.033
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Frame = +2
Query: 149 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 325
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 326 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWST 493
+ G L + + + I+ +G T + SAID SIC +L +S S
Sbjct: 165 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS- 223
Query: 494 LCSTYNSDHYPIIISFP*NTCYCHMAK 574
+ +SDH PI++ +T + K
Sbjct: 224 --ADLSSDHLPILLEINLDTSNLFLQK 248
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 36.3 bits (80), Expect = 0.044
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +2
Query: 212 PHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-IL 388
PH + N + + + F++ GD+N+ H WG + + G L + + + I+
Sbjct: 12 PHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEII 70
Query: 389 NSGSPTRLT-KPGEVISAIDLSIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCY 559
+G T + SAID SIC +L +S S + +SDH PI++ +T
Sbjct: 71 ATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTST 127
Query: 560 CHMAK 574
+ K
Sbjct: 128 LFLQK 132
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.058
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Frame = +2
Query: 149 SNCFSVIAAIVDGICFVSI-YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSS 325
+N S + I C S+ + PH + N + + + F++ GD+N+ H WG +
Sbjct: 106 NNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTK-FILCGDWNAKHRQWGCT 164
Query: 326 VSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLC 499
+ G L + + + I+ +G T + SAID SIC L +
Sbjct: 165 RACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSIC-KGLGRLEKRISSV 223
Query: 500 STYNSDHYPIIISFP*NTCYCHMAK 574
+ +SDH PI++ +T + K
Sbjct: 224 ADLSSDHLPILLEINLDTSTLFLQK 248
>BT010287-1|AAQ23605.1| 831|Drosophila melanogaster LD40663p
protein.
Length = 831
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 666 PSAPLNDPILSYKQYNSDAPSSLNLT 743
P+AP++ P+ + Q++S AP+S LT
Sbjct: 660 PAAPISQPVQDFGQHHSSAPTSACLT 685
>AE013599-2854|AAF57580.2| 831|Drosophila melanogaster CG7417-PA
protein.
Length = 831
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 666 PSAPLNDPILSYKQYNSDAPSSLNLT 743
P+AP++ P+ + Q++S AP+S LT
Sbjct: 660 PAAPISQPVQDFGQHHSSAPTSACLT 685
>AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA
protein.
Length = 241
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 287 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 436
GD+N+ H WG+ N G L +++ + L +G P R + + ++
Sbjct: 57 GDWNTSHWLWGAERCNRRGRALANLVLSTGMSSLVTGGPKRFQEAVDTLT 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,264,138
Number of Sequences: 53049
Number of extensions: 612847
Number of successful extensions: 1340
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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