Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_B07
         (504 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20827| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11)         27   6.6  
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.6  
SB_2213| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8e-26)          27   6.6  
SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)                  27   8.8  

>SB_20827| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 419

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 134 HCQQKSLKCGYC 169
           HC +K  KCGYC
Sbjct: 354 HCSEKPFKCGYC 365


>SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11)
          Length = 1461

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 399 PFTLI-ILKFHINVWIKREPELVSNLMPITFFDNI 298
           PF L  +++ H++ W  +EPE+VS +    + D++
Sbjct: 669 PFLLGGVIEAHLDTWEDKEPEVVSRIRKELYVDDL 703


>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1258

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 399 PFTLI-ILKFHINVWIKREPELVSNLMPITFFDNI 298
           PF L  +++ H++ W ++EPE+VS +    + D++
Sbjct: 537 PFLLGGVIEPHLDTWEEKEPEVVSRIRKELYVDDL 571


>SB_2213| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8e-26)
          Length = 840

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 399 PFTLI-ILKFHINVWIKREPELVSNLMPITFFDNI 298
           PF L  +++ H++ W  +EPE+VS +    + D++
Sbjct: 225 PFLLGGVIEAHLDTWEDKEPEVVSRIRKELYVDDL 259


>SB_29121| Best HMM Match : Toxin_12 (HMM E-Value=8.7)
          Length = 497

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 17  SKSHSSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKDHCQQKSLKCGY 166
           S++ S +    LR IC++YMR+  N   +  +Y        Q KSL C Y
Sbjct: 242 SQNQSLVCVDHLRTICVYYMRTSQNKSLVCVYYMRTS----QNKSLVCVY 287


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,083,372
Number of Sequences: 59808
Number of extensions: 232482
Number of successful extensions: 498
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)