Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_B07
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y15233-1|CAA75517.1| 847|Homo sapiens liver glycogen phosphoryl... 31 3.0
M36807-1|AAA35906.1| 366|Homo sapiens protein ( Human liver gly... 31 3.0
M14636-1|AAA52577.1| 847|Homo sapiens PYGL protein. 31 3.0
BC110791-1|AAI10792.2| 847|Homo sapiens phosphorylase, glycogen... 31 3.0
BC095850-1|AAH95850.2| 847|Homo sapiens phosphorylase, glycogen... 31 3.0
BC082229-1|AAH82229.2| 847|Homo sapiens phosphorylase, glycogen... 31 3.0
BC009895-1|AAH09895.3| 846|Homo sapiens phosphorylase, glycogen... 31 3.0
AF046798-1|AAC18079.1| 847|Homo sapiens glycogen phosphorylase ... 31 3.0
AF046785-1|AAC23504.1| 847|Homo sapiens liver glycogen phosphor... 31 3.0
AF066858-1|AAC17450.1| 847|Homo sapiens liver glycogen phosphor... 30 5.3
U47025-1|AAB60395.1| 843|Homo sapiens glycogen phosphorylase B ... 29 9.2
J03544-1|AAA59597.1| 863|Homo sapiens PYGB protein. 29 9.2
BC030795-1|AAH30795.1| 843|Homo sapiens phosphorylase, glycogen... 29 9.2
BC017045-1|AAH17045.1| 843|Homo sapiens phosphorylase, glycogen... 29 9.2
AL121772-1|CAC00661.1| 843|Homo sapiens phosphorylase, glycogen... 29 9.2
AB209080-1|BAD92317.1| 865|Homo sapiens brain glycogen phosphor... 29 9.2
>Y15233-1|CAA75517.1| 847|Homo sapiens liver glycogen phosphorylase
protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>M36807-1|AAA35906.1| 366|Homo sapiens protein ( Human liver
glycogen phosphorylase type IV mRNA, 3' end. ).
Length = 366
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 80 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 113
>M14636-1|AAA52577.1| 847|Homo sapiens PYGL protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>BC110791-1|AAI10792.2| 847|Homo sapiens phosphorylase, glycogen;
liver (Hers disease, glycogen storage disease type VI)
protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>BC095850-1|AAH95850.2| 847|Homo sapiens phosphorylase, glycogen;
liver (Hers disease, glycogen storage disease type VI)
protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>BC082229-1|AAH82229.2| 847|Homo sapiens phosphorylase, glycogen;
liver (Hers disease, glycogen storage disease type VI)
protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>BC009895-1|AAH09895.3| 846|Homo sapiens phosphorylase, glycogen;
liver (Hers disease, glycogen storage disease type VI)
protein.
Length = 846
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>AF046798-1|AAC18079.1| 847|Homo sapiens glycogen phosphorylase
protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>AF046785-1|AAC23504.1| 847|Homo sapiens liver glycogen
phosphorylase protein.
Length = 847
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKRI-HEYKRQLLNCLHVITMYNRIKKD 594
>AF066858-1|AAC17450.1| 847|Homo sapiens liver glycogen
phosphorylase protein.
Length = 847
Score = 29.9 bits (64), Expect = 5.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF ++ I Y R +LNC+ + Y+ IKKD
Sbjct: 561 SSMFDVQVKSI-HEYKRQLLNCLHVITMYNRIKKD 594
>U47025-1|AAB60395.1| 843|Homo sapiens glycogen phosphorylase B
protein.
Length = 843
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IK+D
Sbjct: 561 SSMFDVHVKRI-HEYKRQLLNCLHVVTLYNRIKRD 594
>J03544-1|AAA59597.1| 863|Homo sapiens PYGB protein.
Length = 863
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IK+D
Sbjct: 561 SSMFDVHVKRI-HEYKRQLLNCLHVVTLYNRIKRD 594
>BC030795-1|AAH30795.1| 843|Homo sapiens phosphorylase, glycogen;
brain protein.
Length = 843
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IK+D
Sbjct: 561 SSMFDVHVKRI-HEYKRQLLNCLHVVTLYNRIKRD 594
>BC017045-1|AAH17045.1| 843|Homo sapiens phosphorylase, glycogen;
brain protein.
Length = 843
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IK+D
Sbjct: 561 SSMFDVHVKRI-HEYKRQLLNCLHVVTLYNRIKRD 594
>AL121772-1|CAC00661.1| 843|Homo sapiens phosphorylase, glycogen;
brain protein.
Length = 843
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IK+D
Sbjct: 561 SSMFDVHVKRI-HEYKRQLLNCLHVVTLYNRIKRD 594
>AB209080-1|BAD92317.1| 865|Homo sapiens brain glycogen
phosphorylase variant protein.
Length = 865
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 29 SSMFATSLRKICMHYMRSILNCV*LHYFYSNIKKD 133
SSMF +++I Y R +LNC+ + Y+ IK+D
Sbjct: 583 SSMFDVHVKRI-HEYKRQLLNCLHVVTLYNRIKRD 616
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,485,712
Number of Sequences: 237096
Number of extensions: 1094218
Number of successful extensions: 5046
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5046
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -